| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1008 |
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| Symbol | |
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| ID | 4021483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1144180 |
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| End bp | 1144818 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637961199 |
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| Product | OmpA/MotB |
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| Protein accession | YP_568147 |
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| Protein GI | 91975488 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.223165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0458619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACA CATCCAGCCT CAACTTCATC CGCGCCATCG TCGGTATCAG CGCCGCATTG
TCTTTCGGGA CCGGCATGGC GCTGGCCGCC GACGATGCGA CCGAGGATCA GATCCTCCGG
GCGTTGGCGC CGAAGAAACC GCTGACCCGC AGCCTCTCCG CGTCGCGACC GGCCGCCGAT
CCCGCCGAGC GGCAGTTCGT CGACACGTTG CGCAACCGCA CCACGCGGTC GCTGTCGTCC
GGCGAGCGTG AGCAGATCGC AACACTGGCG AAGGACAAGC CGAATATCGA TCTCGAGATC
ACCTTCGACT ACAACTCCGC AAATATCAGC CGCAAGGCCG AGCCGGCGGT CGACGCGCTC
GGCAAGGCGC TGTCCAATCC GGATCTCAAG GGATCGACCT TTGTGGTTGC GGGCCACACC
GACAGCATTG GCGGCGACGC ATATAATCAG GAGCTTTCCG AACGCCGCGC TGACACGATC
AAACGTGTAC TCGTCGAAAA ATATGGGATC GCCGGCAGTG ATCTCGTTAC CGTCGGCTAT
GGTGAGAACA AGCCGAAGGA TGCGGTGCGT CCCGCCGATC CGTCCAACCG GCGCGTGCAG
GTGGTCAACA TGACCAGCCA GACCACCGCC TCCAAGTGA
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| Protein sequence | MSNTSSLNFI RAIVGISAAL SFGTGMALAA DDATEDQILR ALAPKKPLTR SLSASRPAAD
PAERQFVDTL RNRTTRSLSS GEREQIATLA KDKPNIDLEI TFDYNSANIS RKAEPAVDAL
GKALSNPDLK GSTFVVAGHT DSIGGDAYNQ ELSERRADTI KRVLVEKYGI AGSDLVTVGY
GENKPKDAVR PADPSNRRVQ VVNMTSQTTA SK
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