| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0997 |
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| Symbol | |
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| ID | 4021472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1126348 |
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| End bp | 1126947 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637961188 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_568136 |
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| Protein GI | 91975477 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.995366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.775153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCG AAGCCCGACC CACCCGCCCG ATCGTGATCA TCGCGGCGTT CGCCGGCAGC
TTGATCGTCG GCCTCGTGGT GCTGCTGTGG CTGCTCGGCG GCCTCGAGAA GGTCGCGGCG
CCGGCGACGA TCGGCGGGCC GTTCCAGCTC ACCGACCAGA ACGGGCAGGT CGTCACCGAG
CAGAGCCTGA AAGGCAAGCC GACGCTGATC TTCTTCGGCT TCACCCATTG CCCGGACATC
TGCCCGACCG CGCTGTTCGA AATCTCGCAG GTGCTGCAGG CGTTGGGCAA GGACGCCGAC
CGCATCAACG CCTATTTCGT TTCGGTCGAT CCCGAGCGCG ACACCCCGGC GGCGATGAAG
GACTATCTGT CGAGCTTCGA CCCGCATCTG AAGGGACTGT CCGGCACGCG CGAAGCCACC
GACCAGATCG AGAAGGCGTA CCGGGTCTAT GCCAAGAAGG TGCCGACCAA GGACGCCGAC
TACACCATGG ACCACACCGC GCTGGTCTAT CTGATGGACA AGTCCGGCAG ATTCGTCTCG
CCGTTCAACA TGAAGCGGAA GCCCGAAGAA GCCGCCGCGG ATCTGAAACG CTATTTGTAG
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| Protein sequence | MAAEARPTRP IVIIAAFAGS LIVGLVVLLW LLGGLEKVAA PATIGGPFQL TDQNGQVVTE
QSLKGKPTLI FFGFTHCPDI CPTALFEISQ VLQALGKDAD RINAYFVSVD PERDTPAAMK
DYLSSFDPHL KGLSGTREAT DQIEKAYRVY AKKVPTKDAD YTMDHTALVY LMDKSGRFVS
PFNMKRKPEE AAADLKRYL
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