| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0976 |
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| Symbol | |
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| ID | 4021451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1106128 |
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| End bp | 1107099 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961167 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_568115 |
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| Protein GI | 91975456 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0972482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGC CTGCATTGTT CAAAGGCCGC CTGTCGATCC CGGTGATCGG CTCGCCGCTG
TTCATCATTT CGGGGCCCGA TCTGGTGATC GCGCAATGCA AAGCGGGTGT GGTCGGCTCG
TTTCCCGCGC TCAATGCGCG GCCGGTGGCG ATGCTCGACG AATGGCTGCA TCGCATCAAG
GAAGAACTCG CCGCCCACGA CAAGGCGCAT CCGGATCGCC CCTCGGCGCC GTTCGCCGTC
AACCAGATCG TTCACAAATC CAACAACCGG CTCGACCAGG ACCTCGCGCT TTGTGAGAAG
CACAAGGTGC CGATGGTCAT TACCTCGCTC GGCGCCCGTG AGGAGCTGAA CCAGGCCGCG
CATCGCTGGG GCGGCATCGT GTTCCACGAC GTCATCAACC AGCGCTTCGC CCGCAAGGCG
ATCGAGAAGG GCGCCGACGG CCTGATCCTG GTCTCGGCCG GCGCCGGCGG ACATGCCGGT
ACGCAATCGC CGTTCGCCTT CGTCACCGAG ACGCGCAGCT GGTTCGACGG CCCGATCGCG
CTGTCGGGCG CGATCGGCAA CGGCCGCGCG ATCCGCGCCG CCCGCGTGCT CGGCGCCGAC
TTCGCCTATA TCGGCTCGGC CTTCATCGCG ACGCAGGAAG CCAACGCGGT GCCGCGCTAC
AAGGACATGA TCACCGCCTC CGGCGCCGAC GACATCGTGT ACTCCAATCT GTTCACCGGC
GTGCACGGCA ACTACCTGAA GCCGTCGATC GTCGCCGCCG GCATGGACCC GGACAATCTC
GAACAGTCCG ATCCCTCGAA GATGAATTTC GGCACCGACG AATCCGGCGA GCGCGCCAAG
CCGAAGGCGT GGAAGGAAAT CTGGGGCGCG GGCCAGGGCA TCGGCAGCAT CACCGGCGTC
GTTCCGGTGG CCGAGATGGT CGGCCGCTTC AAGCAGGAAT ACGACGCCGC GATCGATCCG
CCGCTGGCGT AG
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| Protein sequence | MSMPALFKGR LSIPVIGSPL FIISGPDLVI AQCKAGVVGS FPALNARPVA MLDEWLHRIK
EELAAHDKAH PDRPSAPFAV NQIVHKSNNR LDQDLALCEK HKVPMVITSL GAREELNQAA
HRWGGIVFHD VINQRFARKA IEKGADGLIL VSAGAGGHAG TQSPFAFVTE TRSWFDGPIA
LSGAIGNGRA IRAARVLGAD FAYIGSAFIA TQEANAVPRY KDMITASGAD DIVYSNLFTG
VHGNYLKPSI VAAGMDPDNL EQSDPSKMNF GTDESGERAK PKAWKEIWGA GQGIGSITGV
VPVAEMVGRF KQEYDAAIDP PLA
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