Gene RPD_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0967 
Symbol 
ID4021442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1093705 
End bp1094670 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID637961158 
Producthypothetical protein 
Protein accessionYP_568106 
Protein GI91975447 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGGG TAGCAGGAGC GGATTTCCAG AAGGAAGTTC TGTTCGCGTT GGGCGGTGGC 
GATTCGCAGA TCAACATCGC TGTGCTGGAT GGACCGGTTG ACCGGACCCA TGATTGCTTT
CGTGGCGCGC GGCTGGTCCC GCTCGACACC GCGGCGGCTG AGGGTTCCGA CGGACGCGCG
ACCGCGCAGG GGACGCATAT CGCCAGCCTG ATCTTCGGCC AGCCGTGCAG TTCGGTCGAA
GGCGTCGCTC CGCTGTGCCG CGGATTGATC GCACCGATCT TCAGCGACGA TCGGCTCGAC
TGTTCTCAGG CGGAACTGGC GCAGGCGATC ACGATCGCGC TCGATCACGG CGCCCATATC
ATCCAGATCA GCGGCGGCCT GTTCGGTGGA CCGCGGCAGC CAACCGCGGA ACTGCTTGAT
GCAGTCGCAC GGTGCAACGC GGACAACGCG CTGATCGTCG CCGGCGCCGG CCGTGACGGT
TGCGGCAGCC TGCTGCGCCG TTGCGGCGCG ACCAATCTTC TCCCGGTCGG CGCAATCGAC
CAGCACGGCC GGCTGATCGA CGGCGGCGAC GCCAGCCTGC ACGAGATCGG CATTGCTGTG
CCGGGCGCCA ATCTGATCGG CGCAGCGCCG CAAGGCGGCA TCGACAACCG TCGCGGCGCG
AACTACGCGG CCGCGCTGAT TGCCGGGATC GCCGGGCTGC TGCTCGGCAC GCAACGCCAG
ACCGGACGGA CGCTTGATCC CGGCGCGGCG GTCGAGGCGA TGCTGAGCAC CGCCACGCCG
CGCGTGGCGG CGCGGGCGTA TGAATGCCAC CGCGCTTGGA TCGGCCTGGC GAATGTCGAA
GCCGCCGCGG TGCGCCTGAA CGACGGGATG TACGACACCG CCACGGGGAC GCCGTTCCAA
CTGTGGCATC GCGCCCAGAC GAGCGCAAAA TGGTCGGATC ACGCAGCGTT CCGGCCGCGG
GCGTGA
 
Protein sequence
MVRVAGADFQ KEVLFALGGG DSQINIAVLD GPVDRTHDCF RGARLVPLDT AAAEGSDGRA 
TAQGTHIASL IFGQPCSSVE GVAPLCRGLI APIFSDDRLD CSQAELAQAI TIALDHGAHI
IQISGGLFGG PRQPTAELLD AVARCNADNA LIVAGAGRDG CGSLLRRCGA TNLLPVGAID
QHGRLIDGGD ASLHEIGIAV PGANLIGAAP QGGIDNRRGA NYAAALIAGI AGLLLGTQRQ
TGRTLDPGAA VEAMLSTATP RVAARAYECH RAWIGLANVE AAAVRLNDGM YDTATGTPFQ
LWHRAQTSAK WSDHAAFRPR A