| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0883 |
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| Symbol | |
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| ID | 4021357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 995473 |
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| End bp | 996531 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961073 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_568022 |
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| Protein GI | 91975363 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.272059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.749815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGC TTCGTCACAA CATCATCCGT GCCGGGCTCG ATGCTCTGTA TTTTACCGGC
GCCTATCACG TCCTGCGTCC GATCTTTTCC GGGATCGGGA CGATCTTCAT GCTGCACAAT
GTGAGGCCCG CGCAGAATGG CGCGTTCCGG CCGAACCGCC ATCTCGAGGT CACGCCCGAG
TTCCTTCGGG CAACGCTGCG ACATCTGCGC GCCCAGAACA TCGACATTAT TACTTTGGAC
GAACTGCACC GCAGGCTGAC GGCGCGGGAT TTCGGACGCC GGTTCGCCTG CATCACGCTC
GACGACGGCT ATCGCGACAA TCGCGATTTC GCGCTGCCGG TGTTCGAGGA ATTCCAGGCC
CCGTTCACCG TCTTCGTCGC CAGCGATTTT GCCCAGGGCA CCGGACGGCT GTGGTGGATC
ACCCTCGAGC GGCTGATCGC GCGACACGAC ACGATCGAAG CCGAGATCGG CGGCGTCGCG
GTCAGGATCG ATGCGCGCAC GCCCGAGGCC AAGCAGGATG CGTTCGACCG GCTGCACGAT
CTGCTGCGCG ACCTGCCCGA GAGCGACGAT CTGCCGCGCG CGATGAGCGC GCTATGCGCC
CGCTACGGCA TCGACGAAAC CGCCGCATGC CGCGAGCTTT GCCTGTCGTG GAACGAGTTG
CAGCCGTTCG CCAGGCATCC GCTGGTGACG ATCGGCGCCC ACAGCATCAC CCATTGCATT
CTCGCCAAGC AGCGCGACGC GCTGGCGGCG CACGAATTGT CGATCAGCCG CGTCCGAATC
GAATCGCATC TGCAGCGCGC GGTCGCGCAT CTCGCTTATC CGTATGGCGA CCGCGCCGCC
GCGGGGCCGC GTGAATACGA GCTGGCGCGG CAGGCGGGCT ACAAGACGGC GGTGACGACG
CGGCCCGGAA TGCTGTTTTC CGGCGTCGCC GATCACCTCA CCGCACTGCC GCGGGTCTCG
CTCAACGGCA ACTACCAGGA CGACCGCATT CTGCCGGTGC TGACATCCGG CGCAGCGACC
GCAATGTGGA ACGGATTCCG CCGCGTCGAC GCGGCGTGA
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| Protein sequence | MKQLRHNIIR AGLDALYFTG AYHVLRPIFS GIGTIFMLHN VRPAQNGAFR PNRHLEVTPE
FLRATLRHLR AQNIDIITLD ELHRRLTARD FGRRFACITL DDGYRDNRDF ALPVFEEFQA
PFTVFVASDF AQGTGRLWWI TLERLIARHD TIEAEIGGVA VRIDARTPEA KQDAFDRLHD
LLRDLPESDD LPRAMSALCA RYGIDETAAC RELCLSWNEL QPFARHPLVT IGAHSITHCI
LAKQRDALAA HELSISRVRI ESHLQRAVAH LAYPYGDRAA AGPREYELAR QAGYKTAVTT
RPGMLFSGVA DHLTALPRVS LNGNYQDDRI LPVLTSGAAT AMWNGFRRVD AA
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