| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0878 |
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| Symbol | |
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| ID | 4021352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 988434 |
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| End bp | 989990 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961068 |
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| Product | benzoate-CoA ligase family |
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| Protein accession | YP_568017 |
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| Protein GI | 91975358 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.36254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.31927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGCA TGACCCGGGC AGGGTCGTAT AATGCGGTGA GCTGGCTGCT CGACCGCAAT
GTCGCCGAAG GGCGCGGCGA CAAGCTCGCT TATACGGACA CCGTTTCCGA GCTGACCTAT
CGGGCGCTGC AGCGCGAGAC CTGCCGTGCC GCCAATCTGC TGCGTCGCCT CGGCGTGCGC
CGCGAGGAGC GGGTGGCGAT GATCATGCTC GACACGATCG ACTTTCCGAT CGTGTTTCTC
GGCGCGATCC GCGCCGGCGT GGTGCCGGTG CCGCTCAACA CCCTGCTGAC CGCAGAGCAA
TACGCCTATG TGCTGGCGGA TTGCCGGGCG CGGGTGCTGT TCGTTTCGGA GGCGCTGGTT
CCGGTGGTGA AGGACATCAT CGCCGGGCTG CCGGAGCTGA CGCATGTCGT GGTGTCGGGC
GGCGATGCGC ACGGCCATCT CAAGCTCGCC GACGAACTCG CCCAGGAGAG CGACGCGTTC
GAGACCGCCG CGACCCATGC CGAGGAGCCG GCGTTCTGGC TGTATTCCTC GGGCTCGACC
GGAATGCCCA AGGGCGTCCG GCATCTGCAC GCGAACCTTG CCGCCACCGC CGAGACCTAC
GCCAGGCAGG TCCTCGGCAT CCGCGAGGAC GACGTCGTGC TGTCGGCGGC GAAGCTGTTC
TTCGCCTATG GGCTCGGCAA TTCGCTGACC TTCCCGCTGT CGGTCGGCGC CACCACGGTG
CTGAATGCGG AGCGGCCGAC CCCCGCGGTC GTCTTCAAGC TGATGCAGCG CACTCATCCG
ACGATCTTCT GCGGCGTCCC GACGCTGTTC GCGGCGATGC TCAATGATCC GGCGCTGAAG
ACCGAAACCG CCGGCAATCG CCTGCGCATC TGCACCTCGG CCGGCGAGGC GCTGCCGGAA
TCGGTGGGGC TGGCTTGGAA AGCGCGGTTC GGCGCCGACA TTCTCGACGG CGTCGGCTCG
ACCGAACTGC TGCACATCTT CCTGTCCAAC GCGCCGGGCG ACATCCAGTA CGGCACGTCA
GGCCGTCCGG TGCCGGGCTA CAAGGTGCGG CTGGTCAATG AAGCGGGCGC GGACGTCGCC
GACGGCGAAG TCGGCGAGCT TCTGGTCGAC GCGCCGTCCG CCGGCGAGGG CTACTGGAAT
CAGCGCAGCA AGAGCCGCGC GACGTTCGAG GGCAACTGGA CCCGCACCGG CGACAAATAC
ATTCGCGACG CCAATGGTCG CTACACCTTC TGCGGCCGCG CCGACGACAT GTTCAAGGTG
TCGGGCATCT GGGTGTCGCC GTTCGAGGTC GAGAGCGCGC TGATCACTCA CCCTGCGGTG
CTCGAAGCCG CGGTGGTGCC GGACGCCGAT TTCGACGGCC TGCTGAAGCC GCGCGCCTAT
GTGGTCCTGC GCGACGGCGT CGCCGCCGAC GGCCTGTTCG AGCAACTCAA GGATCACGTC
AAGCACAAGG TCGGGCCGTG GAAATATCCG CGTTGGATCG AGGTGGTGCC CAGCCTGCCG
AAAACCGCCA CCGGCAAGAT CCAGCGCTTC AAGCTACGCG ACGGCGCCTC AGGATGA
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| Protein sequence | MHGMTRAGSY NAVSWLLDRN VAEGRGDKLA YTDTVSELTY RALQRETCRA ANLLRRLGVR
REERVAMIML DTIDFPIVFL GAIRAGVVPV PLNTLLTAEQ YAYVLADCRA RVLFVSEALV
PVVKDIIAGL PELTHVVVSG GDAHGHLKLA DELAQESDAF ETAATHAEEP AFWLYSSGST
GMPKGVRHLH ANLAATAETY ARQVLGIRED DVVLSAAKLF FAYGLGNSLT FPLSVGATTV
LNAERPTPAV VFKLMQRTHP TIFCGVPTLF AAMLNDPALK TETAGNRLRI CTSAGEALPE
SVGLAWKARF GADILDGVGS TELLHIFLSN APGDIQYGTS GRPVPGYKVR LVNEAGADVA
DGEVGELLVD APSAGEGYWN QRSKSRATFE GNWTRTGDKY IRDANGRYTF CGRADDMFKV
SGIWVSPFEV ESALITHPAV LEAAVVPDAD FDGLLKPRAY VVLRDGVAAD GLFEQLKDHV
KHKVGPWKYP RWIEVVPSLP KTATGKIQRF KLRDGASG
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