| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0869 |
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| Symbol | |
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| ID | 4021343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 974643 |
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| End bp | 975974 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961059 |
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| Product | 6-aminohexanoate-dimer hydrolase |
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| Protein accession | YP_568008 |
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| Protein GI | 91975349 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.662915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCATC ACCCAATTCG TCGCGCATCC GCACGCGCAG GCGCGAGTCT GCTGGCGCTC
GGCCTCGCGG CCTTCGCCCA GATCGCCGTC GCCCAAGATG CCCGCAAACC GCCGAGCGCG
GCGCAGAGCG ATCCTGTCGC GAATCGGGTG ATGCAGGACT TTCCGCCGCC GCCGGACAGG
ATCGTGCGCT TCGGCGACGG ATCGAGCAGC CAATTTCCCG GTACGCGCTG GTCGTTCAAC
CACATCCGCG AATTGGGCCC GACCGCGAAT GTCTGGCGCG GCAGCGGCGC GGCGGCGCAA
CTGCCGCGCG CCGAGCGCGA CCTCGATACG ATTGCCTTCG CCACCATGGA TGGCCAGCAA
GTCACCTTCG GCGATCTGCC GGCGCTGACC TATGCGGACG GCCTGCTGGT GCTGCACAAG
GGCGCCATCA TCTACGAGAA ATACTTCGGC GCCGGCGAGG CCCACCGCCC GCATATCGCC
TTCTCCGTCA CCAAGTCGTT CGTCGGCACG CTGGCGGCGA TGCTGGCCGC GGAGGGCAAA
CTCGATCCCG CCGCGCCGGC CGTCAAATAC GTGCCGGAGC TGAAGGGGTC CGCCTATGGC
GACGCCACCG TGCGGCAGGT GATGGACATG ACCATCGGCG TGAAATATTC GGAGAACTAT
TCCGATCCCA AGGCCGAGGT ATTCGACTAT GCAAGGGCCG GCGGGATGAT GCCGCAGCCT
GCCGGCTACA ACGGCCCGAA GACCTTCTTC GACTTCCTCG TGACGTTGCA GAAGGAAGGT
CAGCATGACG ACGCCTTCGC CTACAAAACG TCCAACGCCG AGGTGCTGGC GTGGGTCGTC
CAGCGCGCCA GTGGCCAGTC GTTGGCGGAT CTGCTGTCGC AGCGGATCTG GCAGAAGCTC
GGCGCCGAGG AGGATGCCTA TTTCATGGTC GACAGCATCG GCACCGCATC CGGCGGCGGC
GGGCTCAATA CCACGCTGCG CGATCTCGCC CGGTTCGGCG AGATGATCCG CAACAACGGC
CGCTTCAACG GCCAGCAGAT CGTGCCGGCC GAGGCCATCG CCGACATCCG CAAGGGCGGC
GATGCCGCAA AATTCGCCAA GGCCGGTTAC AAGACGCTGC CGGGCTGGTC GTATCGCGAC
ATGTGGTGGA TCACCAACAA CGCCAATGGG GCCTTCGCCG CGCGCGGCAT CCATGGCCAG
TCGATCTATA TCGACCCCAA GGCGGAGATG GTGATCGTGC GCTACGCCTC GCATCCCTAC
GCCGCCAACG GCGTCAACGA TCCGGTGACG CTGCCGGCCT ATGCGGCGCT GGCCGCCGAA
CTGATGAAAT AG
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| Protein sequence | MMHHPIRRAS ARAGASLLAL GLAAFAQIAV AQDARKPPSA AQSDPVANRV MQDFPPPPDR
IVRFGDGSSS QFPGTRWSFN HIRELGPTAN VWRGSGAAAQ LPRAERDLDT IAFATMDGQQ
VTFGDLPALT YADGLLVLHK GAIIYEKYFG AGEAHRPHIA FSVTKSFVGT LAAMLAAEGK
LDPAAPAVKY VPELKGSAYG DATVRQVMDM TIGVKYSENY SDPKAEVFDY ARAGGMMPQP
AGYNGPKTFF DFLVTLQKEG QHDDAFAYKT SNAEVLAWVV QRASGQSLAD LLSQRIWQKL
GAEEDAYFMV DSIGTASGGG GLNTTLRDLA RFGEMIRNNG RFNGQQIVPA EAIADIRKGG
DAAKFAKAGY KTLPGWSYRD MWWITNNANG AFAARGIHGQ SIYIDPKAEM VIVRYASHPY
AANGVNDPVT LPAYAALAAE LMK
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