Gene RPD_0755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0755 
Symbol 
ID4021228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp846436 
End bp847470 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content58% 
IMG OID637960944 
Productglycosyl transferase, group 1 
Protein accessionYP_567894 
Protein GI91975235 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC GGCACGAGTA CATCATTTTT GCTCCCAATG TCCGAGCCGG GGGTGGGCTG 
GTGCTTCTCA ATGCACTCCT CGAGGTGGCA AACAGGGAGA GCGAGACGCG AGCGTTCTTA
GACGCCAGGG CCGCTGCTTC CTTGCCGCGC TTCCCGAGGA TAGACATTTC CTGGGTTAGA
CCAGGCCTGA TGGGCCGCCT CCAGTCAGAA CGCGATCTGG CGCAAACTGC GGGGAGCACA
TCAAAGATAC TCTGCTTCTC CGGAGTGCCC CCGTTGCTCC GGCCACGCGG CAAAGTCCTC
GTCTATGCAC AAAATGCTCT GACCGTGAGT AAATTCCCGC TGGGTAGTTT CTCCGCCCGC
ACAGCCGCAC GATTGCTGAT GGAACGCGGT TTACATCAGC TTCTTGCGCA CAATGTTGAC
GAATATATCG TTCAGACATC CAGCATGGGT CAGTTCGTGA GGCAGGTGCT GCCGAAGATT
CCCGTCCGAG TCGTGCCCTT TGTTTCCTCC TTGGATGCCC CGGCGGACGC CGCTACACCT
CAGGGCATCT CGGCGCCGTC ATTCCTTTAT CCGGCTCACG ATGATCCGCA CAAAAACCAC
GCGAATCTGC TCGACGCATG GGCGCTTCTG GCAGCCGACG GAATACGCCC CATCCTGATA
CTAACCCTCC AAGATGGCCG GAACCGACTG CATCAACGCA TTGAGGACTG CCGCGCGGAA
GGCGGGGAAA TTCTCTGCAT CGGCTTGCTA AACCGCACTG AAATGATGGC TACGCTTCGA
TCGGCTAGTG CGGTGATCTA CCCATCCCTA ATAGAATCCT TCGGTCTGCC ACTGTTGGAG
GCTCGCCAGT TGGGCAGGCC TATAGTGGCC GCAGAGCTCG ACTATGTGCG CGATGTTTGC
GAACCGACCG AAACGTTCGA TCCCCAATCG CCTAGATCGA TAGCCAGGGC CGTCAAGCGA
ATGCTGAAAG TAAAGGAATC TAGCCCAACG CTCTATTCTG CGTCGGCGGC CTGGAGTGAG
ATGATCCATT CCTGA
 
Protein sequence
MTSRHEYIIF APNVRAGGGL VLLNALLEVA NRESETRAFL DARAAASLPR FPRIDISWVR 
PGLMGRLQSE RDLAQTAGST SKILCFSGVP PLLRPRGKVL VYAQNALTVS KFPLGSFSAR
TAARLLMERG LHQLLAHNVD EYIVQTSSMG QFVRQVLPKI PVRVVPFVSS LDAPADAATP
QGISAPSFLY PAHDDPHKNH ANLLDAWALL AADGIRPILI LTLQDGRNRL HQRIEDCRAE
GGEILCIGLL NRTEMMATLR SASAVIYPSL IESFGLPLLE ARQLGRPIVA AELDYVRDVC
EPTETFDPQS PRSIARAVKR MLKVKESSPT LYSASAAWSE MIHS