| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0712 |
|---|
| Symbol | |
|---|
| ID | 4021185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 799564 |
|---|
| End bp | 800340 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637960901 |
|---|
| Product | phosphoesterase, PA-phosphatase related |
|---|
| Protein accession | YP_567851 |
|---|
| Protein GI | 91975192 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3907] PAP2 (acid phosphatase) superfamily protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.991586 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTA CGGGACTTAT CATCGCGCTC GGGCTGTTCG CCGCAGTCGG ATTGCTGTTC
GGGCTCTATC CCGAGCTCGA CCTGTGGCTC GCCGGGCTGT TCTTCGACCC TGCCACCCGC
AGCTTCCCGC TGAAGGCGGT GCCTTTTGCC AATTTCGCTC GCGACGCGGC GATGTGGATC
GCCTGGGCGT TCGTCGCGCC GTCGATCATC GCGCTGCTGG TGAAGCTGGC GCGGCCGGAC
AAGCCGCTGA TGGTTCGCGG CCGCACCATG ATGTTTCTGG TGGTGACCAT GACGCTCGCC
GCCGGCATCC TCACCAATCT CACCTTCAAG AGCCATTGGG GCCGGCCGCG GCCGATCTTC
GTCACCGAAT TCGCCGGCGC CAACCAATTC ATGCCGTGGT GGGACCCGCG CGGCGCCTGC
CCGAAGAACT GCTCGTTCTT CTCCGGCGAG GCCGCCACCG CCTATTGGAC CTTCGCGCCG
GCGGCGCTGG CGCCGGCGCC GTGGCGGCCG CTGGCCTATG CCGCCGCCTT CACCTTCGGC
ACCGCGACTG GCGTGCTGCG GATGGCGTTC GGCGGCCATT TCTTCACCGA CGTGGCGATC
GCCGGCCTGG TGACGTTTCT GGCGATCTGG CTGATGCACG GCTACATCTA TCGCTGGCGC
AAGACCCGGC TCACCGATGA GCGGATCGAC GCGGCGCTGA CCCGCTTCGC CTGGCCGCTG
TACCGTCGGC GCTCGAAATG GCGCGGCCGC GACGTCGGCG AAGCGCCGGC CACGTGA
|
|---|
| Protein sequence | MNRTGLIIAL GLFAAVGLLF GLYPELDLWL AGLFFDPATR SFPLKAVPFA NFARDAAMWI
AWAFVAPSII ALLVKLARPD KPLMVRGRTM MFLVVTMTLA AGILTNLTFK SHWGRPRPIF
VTEFAGANQF MPWWDPRGAC PKNCSFFSGE AATAYWTFAP AALAPAPWRP LAYAAAFTFG
TATGVLRMAF GGHFFTDVAI AGLVTFLAIW LMHGYIYRWR KTRLTDERID AALTRFAWPL
YRRRSKWRGR DVGEAPAT
|
|---|
| |