Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0705 |
Symbol | |
ID | 4021178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 792049 |
End bp | 792684 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637960894 |
Product | regulatory protein, TetR |
Protein accession | YP_567844 |
Protein GI | 91975185 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAATG ATCTGATCGA AAAAGAAGAA AAATCCGTCG ACCCGCGGCG GGCGGCGATC CTGGAAGCGG CCTTCGAGAT CTTCGTCGAG AAGGGGTTCG AGGCTGCGAC CACCGCCGAG ATCGTCCGCC GGGCGCGGAC CTCGAAACGG ACGCTGTACG AATTCTTCGC CACCAAGCAG GACATTCTGA CGGCGCTGAT CCGCTACGGC AGCCTCAAGA TGCAGCCCTC GCCCGACCTG CCGGCGCCGC AGGATCGTGA ACAGTTCCTC GCCACGCTCC AGCAGTTCGG CGCCACGTTT CTCGCCGAGT TTCTGCATCC GGAGCGGATG GCGATGTATC GGCTGGCGAT CGCCGAAGGC GGCCGCGGCG ACGGCGCGGT GGCGCGCGAA CTCGACGCCA GCGGCCGGCT GCCGGTGGTG CTGGGCGTGA CCCGGTTTTT CGATCAGGCG GCGGCGCGCG GCATCCTGCG CCGCGACGAC ATGGCGACGC TGATCAACGT GTTTTTCTCG GTGCTGATCG GAATCAGTCC GCTGCAGACG TTGCTCGGCA CCGAGCGGCC GCTCACGCCG GAGGCCATTG CCGAAAAGGC CGCGATGGCG ACCCGCGTGC TGCGTCGGAT GATGGAGACG GAGTGA
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Protein sequence | MPNDLIEKEE KSVDPRRAAI LEAAFEIFVE KGFEAATTAE IVRRARTSKR TLYEFFATKQ DILTALIRYG SLKMQPSPDL PAPQDREQFL ATLQQFGATF LAEFLHPERM AMYRLAIAEG GRGDGAVARE LDASGRLPVV LGVTRFFDQA AARGILRRDD MATLINVFFS VLIGISPLQT LLGTERPLTP EAIAEKAAMA TRVLRRMMET E
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