| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0685 |
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| Symbol | |
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| ID | 4021156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 768592 |
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| End bp | 770280 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960873 |
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| Product | protein of unknown function DUF894, DitE |
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| Protein accession | YP_567824 |
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| Protein GI | 91975165 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.667795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGGG GAGCGAAGCG AGGCGTGTTC TCCGCCGGCG GCGTCGCGGC GCCGCTGCGC
TACGCGCTGT TCCGGCGGAT CTGGCTGGCG AGCCTTCTGT CCAATCTCGG CCTGATGATC
AACGGCGTCG GCGCCGCCTG GGCGATGACG CAGATGGCGT CGTCCGCCGA CAAGGTCGCG
CTGGTGCAGA CCGCCTTGAT GCTGCCGATC ATGCTGGTGG CGATGCCGGC CGGCGCGATC
GCCGATATGT ATGATCGCCG AATCGTGGCG CTGGCGTCGC TGACGCTCGG CCTCGGCGGC
TCGACGGTGC TGGCGGTGCT GGCGCATCTC GGCCTGGTGA CTCCGGAGAT CCTGCTCGCC
TTCTGCTTCG TCATCGGCAC CGGCATGGCG CTGTTCGGCC CCGCCTGGCA GGCCTCGGTC
AGCGAACAGG TGCCGGGCGA GGCGCTGCCG GCGGCGGTGG CGCTGAACGG CATCAGCTAC
AACATCGCCC GCAGCTTCGG CCCCGCGGTC GGCGGCATCG TGGTGGCGAC GGCCGGCGCG
GTTGCGGCGT TCGCGGCCAA TGCGGCGCTG TATCTCCCGC TGCTGATGGT GCTGTTCCTG
TGGCGGCGCG TCAGCGAGCC GCCTCGGTTG CCGCCGGAAC GGATGAATCG CGCGATCGTC
TCCGGCGTGC GCTACATCGC CAACTCACCC TCGATCCGGA TCGTGCTGAC GCGGACGCTG
GTCACCGGGA TCGCCGGCAG CTCGGTGCTG GCGCTGATGC CGCTGGTGGC GCGGGACCTG
CTGAAGAGCG GCGCAGAGAC CTACGGCATT CTGCTCGGCG CGTTCGGCGT CGGCGCGGTG
ATCGGCGCGC TCAATGTCGG GCTGGCACGC GAACGGCTGA GCAGCGAAGC CGCGGTGCGC
TCCTGCGCGA TCATCATGGG CCTGGCGATG GCGGCGGTCG CGCTGAGCCG CTCGTCGCTG
ATCAGCGCCG CGGCGCTGGT GGTCGCGGGC GCGGTGTGGA TGCTGGCGAT CGCGCTGTTC
AATATCGGCG TGCAGCTATC CGCGCCGCGC TGGGTGGCGG GCCGCTCGCT GGCGGCGTTT
CAGGCGTCGA TCGCCGGCGG CATCGCAATC GGAAGCTGGG TCTGGGGCCA TGTCGCCGAT
CTGGCGGGCG TTGCGCCGTC GATGCTGATC TCGGCCGGGG TGATGTTGGT CTCGCCGCTG
GTCGGACTGC TTCTGCGAAT GCCGTCGGTC GGCACCCAGA CCGAGGATGC CGAACTCCTC
GCCGACCCGG AAGTGCGGCT GGCCTTGACG CCGCGCAGCG GACCGGTGGT GATCGAGATC
GATTACCGCG TCGATCAGGA CGACGCCCGC GCGTTTCACG GCGTGATGCA GCAGGTCCAG
CTCAGCCGCC AGCGTAACGG CGCCTATGGC TGGTCGATCG CCCGCGACAT CGCCGACCCG
GAACTGTGGA CCGAGCGCTA TCACTGCCCG ACCTGGCTGG ACTATCTGCG ACAGCGAAGC
CGTTCGACTC AGCACGATCG CGCCATGCAC CAGCGCGCGA TGGCGTTTCA CCGCGGGCCG
GCCCCGATCC GGGTGCGCCG GATGCTGGAG CGGCCGTTCG GATCGGTGCG CTGGAAGGAC
GAGTCGCCCG ATCGCCCCAC CGGGACCGAA GTGCTGCCGG TCGCAGGCGT CAGCGGCGGT
TCGACCTGA
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| Protein sequence | MTGGAKRGVF SAGGVAAPLR YALFRRIWLA SLLSNLGLMI NGVGAAWAMT QMASSADKVA
LVQTALMLPI MLVAMPAGAI ADMYDRRIVA LASLTLGLGG STVLAVLAHL GLVTPEILLA
FCFVIGTGMA LFGPAWQASV SEQVPGEALP AAVALNGISY NIARSFGPAV GGIVVATAGA
VAAFAANAAL YLPLLMVLFL WRRVSEPPRL PPERMNRAIV SGVRYIANSP SIRIVLTRTL
VTGIAGSSVL ALMPLVARDL LKSGAETYGI LLGAFGVGAV IGALNVGLAR ERLSSEAAVR
SCAIIMGLAM AAVALSRSSL ISAAALVVAG AVWMLAIALF NIGVQLSAPR WVAGRSLAAF
QASIAGGIAI GSWVWGHVAD LAGVAPSMLI SAGVMLVSPL VGLLLRMPSV GTQTEDAELL
ADPEVRLALT PRSGPVVIEI DYRVDQDDAR AFHGVMQQVQ LSRQRNGAYG WSIARDIADP
ELWTERYHCP TWLDYLRQRS RSTQHDRAMH QRAMAFHRGP APIRVRRMLE RPFGSVRWKD
ESPDRPTGTE VLPVAGVSGG ST
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