| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0632 |
|---|
| Symbol | |
|---|
| ID | 4021102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 717279 |
|---|
| End bp | 718118 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637960820 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_567771 |
|---|
| Protein GI | 91975112 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.119483 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAGAC GCGCGCTGTC GGCTCTGGTG GTTGCGCTCG CTGCGGCTGT GCTGTCGGGC
GCCGTTGCCG CGCCGTTGCC GCGCCTCGCG TCGATCAATG TCTGCACCGA TCAGTTGCTG
ATGACGCTCG CCGATCCGGA GCAAATTCTC GGCCTCAGCC CCTATGCACG CGACGAGGCG
CGGTCGTTCC TCGCGAACAA GGCCGCCGCC TTTCCGATGC TGTCCGGCGA GGCCGAGGAC
GTGCTGATGC TGAAGCCGGA CATCGTCGTC ACCGGCCGCT ACACCAAACG CGCGACGCGC
GAGCTGCTGA AGCAGCAGGG CCAGCGCGTC ATCGAGTTCG ATACACCGCG TACGCTCGAC
GAGGTCAAGG CGCTGATCCG CACGATGGGC GATCTGGTCG GTCACCCCGA TCGCGCGGTC
GCTGCGAACG CCCGCATCGA CACGGCGACC GCGACAGCCC GGAAAGCCGC GTCCGACAAG
GCTTTTCGCG TGCTGCCGCT GGAGCGGCGC GGCTGGGTTT CGGGCGGCGA TAGTCTGATG
ACGTCGCTGC TGTCGACCGT CGGTCTGGTC AACGCCGCGA GCGCGCTTGG TATCAAGCTC
GGCGGCTTTG CATCGCTCGA AGCGGTCGTC AGCTTGCGTC CGGACTATTT GCTGATCTCC
GAAGACGGCG ATTTTGCCGA GGACGAAGGC CGTGCTTTCG TGTTGCATCC CGCGCTCGAA
CGGTTCTACC CGCCGTCGAA GCGGATCACG ATTCCGGAGC GGCTGACGGT GTGCGGCGGG
CCGATGCTGG CGGATGCGCT CGATCATCTG AGCGCCGAAC TCTCTCGCGT GGAGCACTGA
|
|---|
| Protein sequence | MRRRALSALV VALAAAVLSG AVAAPLPRLA SINVCTDQLL MTLADPEQIL GLSPYARDEA
RSFLANKAAA FPMLSGEAED VLMLKPDIVV TGRYTKRATR ELLKQQGQRV IEFDTPRTLD
EVKALIRTMG DLVGHPDRAV AANARIDTAT ATARKAASDK AFRVLPLERR GWVSGGDSLM
TSLLSTVGLV NAASALGIKL GGFASLEAVV SLRPDYLLIS EDGDFAEDEG RAFVLHPALE
RFYPPSKRIT IPERLTVCGG PMLADALDHL SAELSRVEH
|
|---|
| |