Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0630 |
Symbol | |
ID | 4021100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 715471 |
End bp | 716496 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637960818 |
Product | transport system permease protein |
Protein accession | YP_567769 |
Protein GI | 91975110 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.317375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAC GCCCAAAACC GGATTCGCGA GCTTCGGTCG TGACGGCCGC TTTGCTGATT CTGGTCGGCG TGCTGGCGCT CGGCTCGCTG GGGGTCGGGC CGGTGAAACT GTCGCCGCTG ACCGTGATCG ACGCCCTGAT CGGCCGCGCT GGCGATGTGC AGCAGATCAT CGTGCAGCAG ATCAGGCTGC CGCGCGCGAT CCTGGCGCTG GCGATCGGCG GCATTCTCGG CTTGTCCGGC GCGGCGCTGC AGGGTCTGCT GCGTAACCCG CTGGCGTCGC CGTCGCTGTT CGGCGCGCCG CAATCGGCGG CTTTCGGCGC GGTGCTGATC ATCGCGCTGG GCTGGGCCGA TGTTCGGTCC TACGCGCTGC CGGTCGCCGG CATCACGATG GCGTTCGTCT CGGTGTTCAT GCTGCTCGCG GTGGCCGGCC GCAGCGCCAA CCTGCTGCTT CTCATTCTTG CGGGTCTGGC CATCTCGAGT CTCGCAGGCG CCGCGACCGC GCTGGTGATG AACCTCTCGC CCAATCCGTT CGCCAGCCTC GAGATCGCGT TCTGGCTGCT CGGCTCGCTC GAGGACCGCA GCTTTCGCCA CGTCGCGCTG GCGCTGCCCT TCATCCTCGC CGGCGGCGTT CTGCTGCTCA GTCAGCGCGC CGCGTTCCGT GCGCTCAGCC TCGGCGAGGA AACCGCGCAG AGCCTCGGGG TCGATGTCGG CCGGTTGCGG CTGATCGTGA TCATCGGCGT CGCGCTCGGG GTCGGCGGCG CGGTCTCGGT CTCGGGGACG ATCGGGTTCA TCGGTCTGGT CGCGCCGCAT CTGGTGCGGC CGCTGATCGG CCACGATCCG GCGCGGCTGC TGGTGCCGAG CGCGCTCGCG GGCGCAGCGC TGCTGCTCGC CGCCGACATC GCGGTGCGGG TCATTCCCTC CACCACCGAT ATCAAGGTCG GCGTGCTGAC CTCGATCATC GGCGTGCCGT TCTTCCTGTA TCTGATCGTG CGGGAGCGTC GCGCCTTGGG CGGAGGCTTC TCATGA
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Protein sequence | MTTRPKPDSR ASVVTAALLI LVGVLALGSL GVGPVKLSPL TVIDALIGRA GDVQQIIVQQ IRLPRAILAL AIGGILGLSG AALQGLLRNP LASPSLFGAP QSAAFGAVLI IALGWADVRS YALPVAGITM AFVSVFMLLA VAGRSANLLL LILAGLAISS LAGAATALVM NLSPNPFASL EIAFWLLGSL EDRSFRHVAL ALPFILAGGV LLLSQRAAFR ALSLGEETAQ SLGVDVGRLR LIVIIGVALG VGGAVSVSGT IGFIGLVAPH LVRPLIGHDP ARLLVPSALA GAALLLAADI AVRVIPSTTD IKVGVLTSII GVPFFLYLIV RERRALGGGF S
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