Gene RPD_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0630 
Symbol 
ID4021100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp715471 
End bp716496 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content69% 
IMG OID637960818 
Producttransport system permease protein 
Protein accessionYP_567769 
Protein GI91975110 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.317375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAC GCCCAAAACC GGATTCGCGA GCTTCGGTCG TGACGGCCGC TTTGCTGATT 
CTGGTCGGCG TGCTGGCGCT CGGCTCGCTG GGGGTCGGGC CGGTGAAACT GTCGCCGCTG
ACCGTGATCG ACGCCCTGAT CGGCCGCGCT GGCGATGTGC AGCAGATCAT CGTGCAGCAG
ATCAGGCTGC CGCGCGCGAT CCTGGCGCTG GCGATCGGCG GCATTCTCGG CTTGTCCGGC
GCGGCGCTGC AGGGTCTGCT GCGTAACCCG CTGGCGTCGC CGTCGCTGTT CGGCGCGCCG
CAATCGGCGG CTTTCGGCGC GGTGCTGATC ATCGCGCTGG GCTGGGCCGA TGTTCGGTCC
TACGCGCTGC CGGTCGCCGG CATCACGATG GCGTTCGTCT CGGTGTTCAT GCTGCTCGCG
GTGGCCGGCC GCAGCGCCAA CCTGCTGCTT CTCATTCTTG CGGGTCTGGC CATCTCGAGT
CTCGCAGGCG CCGCGACCGC GCTGGTGATG AACCTCTCGC CCAATCCGTT CGCCAGCCTC
GAGATCGCGT TCTGGCTGCT CGGCTCGCTC GAGGACCGCA GCTTTCGCCA CGTCGCGCTG
GCGCTGCCCT TCATCCTCGC CGGCGGCGTT CTGCTGCTCA GTCAGCGCGC CGCGTTCCGT
GCGCTCAGCC TCGGCGAGGA AACCGCGCAG AGCCTCGGGG TCGATGTCGG CCGGTTGCGG
CTGATCGTGA TCATCGGCGT CGCGCTCGGG GTCGGCGGCG CGGTCTCGGT CTCGGGGACG
ATCGGGTTCA TCGGTCTGGT CGCGCCGCAT CTGGTGCGGC CGCTGATCGG CCACGATCCG
GCGCGGCTGC TGGTGCCGAG CGCGCTCGCG GGCGCAGCGC TGCTGCTCGC CGCCGACATC
GCGGTGCGGG TCATTCCCTC CACCACCGAT ATCAAGGTCG GCGTGCTGAC CTCGATCATC
GGCGTGCCGT TCTTCCTGTA TCTGATCGTG CGGGAGCGTC GCGCCTTGGG CGGAGGCTTC
TCATGA
 
Protein sequence
MTTRPKPDSR ASVVTAALLI LVGVLALGSL GVGPVKLSPL TVIDALIGRA GDVQQIIVQQ 
IRLPRAILAL AIGGILGLSG AALQGLLRNP LASPSLFGAP QSAAFGAVLI IALGWADVRS
YALPVAGITM AFVSVFMLLA VAGRSANLLL LILAGLAISS LAGAATALVM NLSPNPFASL
EIAFWLLGSL EDRSFRHVAL ALPFILAGGV LLLSQRAAFR ALSLGEETAQ SLGVDVGRLR
LIVIIGVALG VGGAVSVSGT IGFIGLVAPH LVRPLIGHDP ARLLVPSALA GAALLLAADI
AVRVIPSTTD IKVGVLTSII GVPFFLYLIV RERRALGGGF S