| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0602 |
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| Symbol | |
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| ID | 4021071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 679926 |
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| End bp | 683234 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960790 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_567741 |
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| Protein GI | 91975082 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1038] Pyruvate carboxylase
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit
[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTC GCAAATTGCT GATCGCCAAT CGGGGCGAGA TCGCGATCCG CATCGCGCGC
GCCGCCGCCG ACGCCGGGCT CGCCACCGTG GCGATTTATC CCGCCGACGA TTCGGCGTCG
CTGCATCTGC GGATCGCCGA CGAGGCGCGG GAGATTCCCG GGCGCGGCGC GCGGGCCTAT
CTCGACATCG AAGGCGTGAT CGCCGCCGCC AAGGCGGCGC ATTGCGACGC CCTGCATCCG
GGCTACGGCT TTCTCAGCGA GAATGCCGAT CTGGCGCGGC GCTGCGCCGA AGAAGGCATC
ACCTTCGTCG GGCCATCGCC GGAGGCGTTG CGATTGTTCG GCGACAAGGT CGCGGCCAAG
GAGTTGGCGA AGCGCTGCGG CGTCCCGATC ATTGCCGGCA CCACGGGGCC TTCGACACTG
CAGGACGTCA AGGCGTTCTT CGCATCGCTC GGCGACGCCG CCGCGGTGAT GATCAAGGCG
ATGGCCGGCG GCGGCGGTCG CGGTATGCGC ATCGTCGAAC GCGCGGACGA TCTGGAAGAG
GCCTATGCGC GTTGCCAGTC CGAAGCCAAG GCGGCATTCG GCAGCGACGG GGTCTACGCC
GAGCGGCTGA TCCGCAAGGC TCGGCATATC GAAGTGCAGA TCATCGGCGA CCGGCATGGC
GGCATCAGCC AGCTCTGGGA GCGCGAATGC ACGATCCAGC GCCGCAATCA GAAGCTGATC
GAGATCGCGC CGAGCCCGTC GCTCAGCGAC AGCCTGCGCG GGCGGATCGT CGCGGCCGCG
AAGGCGCTCG CGGCGGCGGC GAACTACGAC AGCCTCGGCA CCTTCGAATT TCTGGTCGAT
GGCGAAGCAG GCGAAAGCGA CGGCGCGTTC GCCTTCATCG AAGCCAATCC GCGGCTGCAG
GTCGAGCACA CCGTGACCGA GGAAGTGCTG TCGATCGATC TGGTGCGATC TCAGCTTGCT
GTGGCGGGCG GCGCGACGCT GGCCTCGCTC GGCCTCGATC AGGCTGCCGT GCCGCGCCCG
CGCGGCTTTG CGATGCAGCT CCGCATCAAC ATGGAAACCA TGGACGAAAG CGGCGCTACC
AAACCGACCG GCGGCACGCT GGCGATCTTC GAGCCGCCGT CGGGCCCGGG CGTGCGCGTC
GATACGTTCG GTTATGCCGG CTACAAAACC AGCGCGGCGT TCGACTCTTT GCTCGCCAAG
GTGATCGTTC ACACCCCGTC GCAATGGCCG GATGTCGTCG CCAAGGCCGC GCGCGCCTTG
CGCGAATTCC GGATCGATGG CGTCGGAACT AATATCCCGT TCATCCAGGC GATCCTGGCC
CATGCCGACT TCAAGGCCAA CCGGGTCAGT ACCGGCTTCA TCGACCGCAA CGTCGCCGAG
CTGGTCGGCG CTGCGCAAGG CTTCGCGGGT CCGCTGATCG CCACGCCCGG CGCGACAGCG
CACCAAGGCG CTGCATCGGC GAAGATCGAC TCGGCGCCGG ACGGCGCGGT CGCGATCACC
GCACCGCTGC AGGGGACGGT GGTTGCGATC ACGGTCGCGG AAGGTGATGT GGTTCGGCCG
GGGCAGCAGC TCGCGGTGCT CGAATCGATG AAGATGGAGC ATCTCGTCAT CGCCGAGCAG
GGCGGCCGCA TCCGGCGCAT CGTCACCGCC GACGGCGTGA CGCTGATGCA GGGCGAGGCG
ATCCTCTATC TCGAGCCGCA GGACATCGAA GGCGATCAGC TCGCCGAGGA AGACGAGGTC
GATCTCGACG AGATTCGTCC GGATCTTGCC GAGATGCTGG CGCGACAGGG CAACACCAGC
GACAACAGCC GCCCCGACGC GGTCGAGCGC CGCCGCAAGA CCAATCAGCG CACCGCGCGC
GAAAACATCG CCCAGCTCGT CGATGACGGC TCGTTCATGG AGTATGGCAG CCTGGCGATC
GCGGCGCAGC GCCGCCGCCG GTCGCTCGAC GACCTGATCA AGAACACGCC GGCCGACGGC
CTGATCGCCG GCGTCGCCAC CGTCAATGCC GCGCAGTTCG GTGAACACGG CGCCCGCTGC
ATGGTGATCG CCTACGACTA CACGGTGCTG GCCGGCACCC AGGGCCACAT GAATCACAAG
AAGATCGACC GGATGCTGAC GCTGGTCGAG CAGTGGCGGA TTCCGCTGGT GTTCTACGCC
GAGGGCGGCG GCGGCCGTCC CGGCGACACC GACCGGCTCG GTCTCACCGG TCTCGACGGC
CCGTCCTTCG TGCAGTTCGC CAGGCTTTCG GGCCTGGTGC CGGTGGTCGG CGTCGTCTCC
GGCTATTGCT TCGCCGGCAA TGCCGCGATG CTCGGCTGCT GCGACGTGAT CATCGCCACG
CAGAACGCCT CGATCGGGAT GGGCGGGCCG GCGATGATCG AGGGCGGCGG GCTCGGCGTG
TATCACCCCG CCGAAGTCGG TCCCGTCTCG TTCCAGTCGC CGAACGGCGT GGTCGACATC
CTGGTCGAGG ACGAGGAGGA GGCGACGCGG GTCGCGCAGA AATATCTGTC GTACTTCCAG
GGCGCGGTGT CCGAATGGCG CGCCAGCGAT CAGCGGCTGC TGCGGCGTGC GATCCCGGAG
AACCGGCTGC GGGTCTACGA TATCCGTCAC GTCATCGATC TGATCGCCGA CGAAGGATCG
GTGCTCGAGC TGCGCCGCGA TTTCGGCGTC GGGATGATCA CCGCGTTCAT TCGCGTCGAA
GGCAAGCCGT TCGGCTTGAT CGCCAACAAT CCGAAGCATC TCGGCGGCGC GATCGACGCC
GACGCCGGCG ACAAGGCGGC GCGCTTTCTG CAATTGTGCG ACGCCTTCGA CATTCCGATC
GTGTCGCTGT GCGATACGCC CGGTTTCATG GTCGGGCCGG AGGCGGAGAA GACCGCGATC
GTCCGCCATG TCGCGCGGAT GTTCGTCACC GGCGCCAGCC TGACCGTGCC GCTGTTCGGC
ATCGTGCTGC GCAAGGGCTA CGGCCTCGGC GCGCAATCGA TGCTCGGCGG CGGTTTCCAC
GCCTCGTTCT TCACCGCGGC GTGGCCGACC GGCGAGTTCG GCGGCATGGG TCTGGAAGGC
TATGTCCGCC TCGGCTTCCG CAAGGAGATG GAGGCGATCG CCGATCCGGT CGAGCGCGAG
ACGTACTACA AGAACAAGGT CGCCGAGATG TATGCCAACG GCAAGGCGGT CTCGATCGCG
TCGGTGCTCG AAATCGACAA TGTCATCGAT CCGGCGGAGA CGCGGCGCTG GATCATGGCC
GGCCTGCGCT CGGTGCCGAC GCCGCCTCAA CGCGACGGGC GCAAGCGGCC CTGCATCGAC
GCCTGGTAG
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| Protein sequence | MPFRKLLIAN RGEIAIRIAR AAADAGLATV AIYPADDSAS LHLRIADEAR EIPGRGARAY
LDIEGVIAAA KAAHCDALHP GYGFLSENAD LARRCAEEGI TFVGPSPEAL RLFGDKVAAK
ELAKRCGVPI IAGTTGPSTL QDVKAFFASL GDAAAVMIKA MAGGGGRGMR IVERADDLEE
AYARCQSEAK AAFGSDGVYA ERLIRKARHI EVQIIGDRHG GISQLWEREC TIQRRNQKLI
EIAPSPSLSD SLRGRIVAAA KALAAAANYD SLGTFEFLVD GEAGESDGAF AFIEANPRLQ
VEHTVTEEVL SIDLVRSQLA VAGGATLASL GLDQAAVPRP RGFAMQLRIN METMDESGAT
KPTGGTLAIF EPPSGPGVRV DTFGYAGYKT SAAFDSLLAK VIVHTPSQWP DVVAKAARAL
REFRIDGVGT NIPFIQAILA HADFKANRVS TGFIDRNVAE LVGAAQGFAG PLIATPGATA
HQGAASAKID SAPDGAVAIT APLQGTVVAI TVAEGDVVRP GQQLAVLESM KMEHLVIAEQ
GGRIRRIVTA DGVTLMQGEA ILYLEPQDIE GDQLAEEDEV DLDEIRPDLA EMLARQGNTS
DNSRPDAVER RRKTNQRTAR ENIAQLVDDG SFMEYGSLAI AAQRRRRSLD DLIKNTPADG
LIAGVATVNA AQFGEHGARC MVIAYDYTVL AGTQGHMNHK KIDRMLTLVE QWRIPLVFYA
EGGGGRPGDT DRLGLTGLDG PSFVQFARLS GLVPVVGVVS GYCFAGNAAM LGCCDVIIAT
QNASIGMGGP AMIEGGGLGV YHPAEVGPVS FQSPNGVVDI LVEDEEEATR VAQKYLSYFQ
GAVSEWRASD QRLLRRAIPE NRLRVYDIRH VIDLIADEGS VLELRRDFGV GMITAFIRVE
GKPFGLIANN PKHLGGAIDA DAGDKAARFL QLCDAFDIPI VSLCDTPGFM VGPEAEKTAI
VRHVARMFVT GASLTVPLFG IVLRKGYGLG AQSMLGGGFH ASFFTAAWPT GEFGGMGLEG
YVRLGFRKEM EAIADPVERE TYYKNKVAEM YANGKAVSIA SVLEIDNVID PAETRRWIMA
GLRSVPTPPQ RDGRKRPCID AW
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