Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0553 |
Symbol | xerC |
ID | 4021021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 624737 |
End bp | 625726 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637960740 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_567692 |
Protein GI | 91975033 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.172687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.167276 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCGG ACTCCTTTAT GGCCAAAGCC CAACCCGCCC CCGCGCCGAT CGAGCTCGCC TGCGCCAGCG CCGATCTCAA CGCCGAGTTC ACCCGCTGGC TGTCGCATCT GCGCGCCGAG CGACGGCTCT CCGGCAAGAC GCTGGAGGCC TATGCGCGGG ATTTGCGCCA GTTCCTGATC TTCCTCGCCG GCCATTGGGG TGGCGTGGTC ACGCTCGGTC GATTCGCACG GCTGGAGGCC ACCGATGTCC GCGCCTTCAT GGCGGCGCGG CGCGGCGATG CGATCGCCGG CCGTTCGCTG ATGCGGGCGC TGGCCGGACT GCGCTCGTTC GGCCGCTTCC TTGAACGCGA AGGCAAGGGC AGCGTCGGCG CGCTGTCGTC GGTGCGGGCG CCCAAGATAA AGAAAAGCCT GCCCAAACCG ATCCAGATCG CCGCCGCCAA ACGGCTCGCC GACGCCGACG AGCGCGCCGG CGAGGACCGC GAGACCTGGA TCCTCGTCCG CGACGCCGCG GTGATGGCGC TGTTATACGG CTCAGGCCTG CGCATTTCCG AAGCGCTTGG GCTGCGCCGC CGCGATGTGC CGGCGCCGGG CAAAGGCGAC ACGCTGATCG TGCTCGGCAA GGGCAACAAG ACCCGGATGG TGCCGGTGCT GCAAAACGTG CTGGCGCAGA TCGCCGATTA CGCGAGCGCC TGCCCGCATC CGCTGCCGCC GGACGGGCCG ATGTTCGTCG GCGCCCGAGG CGGACCGCTC AGCCCGCGAA TCATCCAGCT CGCGATGGAG CGGCTGCGCG GCTCGCTGGG ATTGCCCGAC TCGGCCACGC CCCATGCGCT GCGGCACTCC TTCGCGACGC ATCTTTTGAC CCGCGGCGGC GATCTGCGGG CGATCCAGGA GCTGCTCGGC CACGCCTCGC TGTCGACCAC GCAGGTTTAC ACCGGCATCG ATACCGAACG GCTGCTGGAA GTCTACAACA GCGCCCACCC GCGGGCATGA
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Protein sequence | MRPDSFMAKA QPAPAPIELA CASADLNAEF TRWLSHLRAE RRLSGKTLEA YARDLRQFLI FLAGHWGGVV TLGRFARLEA TDVRAFMAAR RGDAIAGRSL MRALAGLRSF GRFLEREGKG SVGALSSVRA PKIKKSLPKP IQIAAAKRLA DADERAGEDR ETWILVRDAA VMALLYGSGL RISEALGLRR RDVPAPGKGD TLIVLGKGNK TRMVPVLQNV LAQIADYASA CPHPLPPDGP MFVGARGGPL SPRIIQLAME RLRGSLGLPD SATPHALRHS FATHLLTRGG DLRAIQELLG HASLSTTQVY TGIDTERLLE VYNSAHPRA
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