| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0530 |
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| Symbol | |
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| ID | 4020998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 601496 |
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| End bp | 604090 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637960717 |
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| Product | hypothetical protein |
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| Protein accession | YP_567669 |
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| Protein GI | 91975010 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGG CCGCCGATCC CCTCGCCAAG TCCCCATCCA CGTCCGCGCC GACATCGCGC
GGCCTGTCGC TGCCGTTGCG CTATGCGCTG CGCGAGATGC GCGGCGGCCT CAACGGCTTC
TATGTCTTCA TCGCCTGCAT CGCGCTCGGC GTGATGGCGA TCGCCGGCGT CGGCTCGGTC
GCCGCCAGTC TGGGCGACGG CCTCGCCCGC GAAGGCCGCA CGCTGCTCGG CGGCGACGTC
GCGTTCTCGC TGATTCAGCG CGAGGCCACC GCCGAAGAGC TCGGCTATCT GCGTGAGCGC
GGCCCGGTCT CGGTCGCGGC GACGTTGCGC GGCATGGCGC GCACCGCTGC GGGCCAATCG
GCGCTGGTCG AGATCAAGGC GGTCGACAAC CTCTATCCGA TGCTCGGCGA ACTGAAGCTC
GCGCCGCAAC TGCCGACCGC CGAGGTGCTG GCGGAGCGTG ACGGCGCATT CGGCGCCGCC
GCCGACGCCG CCTTGCTGGC CCGGCTCGAT CTCAAGATCG GCGACCGCGT CACGGTCGGC
AGCGCCGCGT TTCAAATCCG CAGCGTCGTC GCCTCCGAGC CGGACAAGCT CGCCGGCAAT
GTCGGCTTCG GCCCGCGCTT CCTGATCAGC GACGCGGCGC TGCGCGCCAC CCAATTGCTG
CAGCCCGGCA GCCTGGTGCG CTGGATCTAT CGCGTCCGGC TGCCGGACAA CCGCGCCGAC
GACAAGGCCG CGCAGGCTTT CGCCGATGCG ACCCGCGCGG CGCTGCCGCA GGCCGGCTGG
GAAATCCGCA GCCGCGGCAA CGCCTCGCCG CAGCTCGAGC GCACCATCAC CCGTTTCACC
CAATTCCTGA CGCTGGTCGG CCTCGCTGCG CTGCTGGTCG GCGGCGTCGG CGTCGCCAAT
GCGGTGAAGA GCCATATCGA CCGCCGCCGC GACGTGATCG CGGCGTTCAA GGCGCTCGGC
GCCACCGGTC ACGACGTGTT CGCGATCTAT CTCACCCAGG TGCTGGTGCT GGCGACGATC
GGCTCGCTGA TCGGGCTCGC GCTCGGCGCC GCGCTGCCGT TCGTCATCAC CGGATTGTTC
GGCAAGCTGC TGCCGCTGCC GGTGGTGGCG GCGCTGCATC CCGAGGAACT GGCGCTGTCG
CTGGTCTACG GCCTGCTGAC CGCGCTCGCC TTCGGGCTGT GGCCGCTGGC GCAGGTGCGC
GACGTGCCGG TGGCGACGCT GTTCCGCGAG GCCGCCACGG CGGACGCGCA CCGGCCGAAA
TTCCGGCACA TCGTCTGGAT CGGCGTGGTG ATCGCGCTGC TGCTCGCGGT GGTGATCGGC
CTTGCTTACG ACAAGCGCGT CGCGATCGCC TTCGTGGTTG CCGCGGTCGT CGTCTTCGCG
CTGTTGCGAG GCGTCGCCGC GGGGCTGATG GCGATCGCCC GCTGGTTGCC GCGTTCGCGC
ATCACCATGC TGCGGCTGGC GATCGCCAAC ATCCATCGCC CCGGCGCGCT GACGCCATCG
GTGGTGCTGT CGCTGGGCCT GGGCCTCGCC GTGCTGGTGA CGATCTCGCA GATCGACGGC
AATCTGCGTC GGCAATTTCT CGCCGCGCTG CCCGAGAGGG CGCCGACCTT CTTCTTCATC
GACATCCCGT CGAGCGAGAC CGAACAGTTC AGCGGCTTTC TGACCCGGAT CGCGCCGAAA
GCGACGCTGG AGGACGTGCC GATGCTGCGC GGCCGGATCG TCGCCGCGCG CGGCGTTCGC
GCCGAGGATC TCAAGCCGGG GCAGGACGCC GAATGGGTGC TGCAGAGCGA CCGCGGCCTG
ACCTATGCGG CCGAGATGCC GGCGGGCTCC AAGGTCGTCG AAGGCCATTG GTGGCCCAAG
GATTATGACG GCAAGCCGCT GGTGTCGTTC GAGAAGAAGC TGGCGGACGG GCTCGGACTG
AAGATCGGCG ACAGCGTCAC CGTCAACGTG CTCGGCCGCG AGATCACGGC GACGATCAGC
AATCTGCGCA GCGTCGACTG GCAGAGCCTC GGGATCAATT TCGTGCTGGT GTTCTCGCCG
AATACGTTCC GTGGCGCGCC ACATACGCAT ATCGCCACCC TGACCGAGAC CGGCAGCACG
CCGGAGAGCG ACGCCGCTTT GATCAAACAG GTGGCGGACA AATTCCCGAT GGTCACCAGC
GTCCGGGTCC GCGAGGCGCT GGAGACGGTC GGCGGCGTTG TCAGCAATCT GGCGTTGGCT
GTGCGCGGCG CGAGTTCGGT GACGCTGATT TCGGCGATCC TGGTGCTCGG CGGCGCGCTC
GCCGCGGGCC ACCGCCATCG CGTCTACGAC GCGGTGATCC TGAAGACGCT CGGCGCCACG
CGGGGCCGGC TGATCGGCGC CTTCGCGCTC GAATACATGA TGATCGGGCT CGCCACGGCG
GTATTCGGCG TGATCGCCGG GTCGGCCGCG GCGTGGCTGA TCGTCACACG GCTGATGTCG
TTGAGCTTCG CCTGGCAGGC GGGCTCCGCT GCCGGCGTGG TCGTCGCGGC TCTGGTGGTC
ACCGTCGGCC TGGGACTGGT TGGAACTCTG CTGGCGCTGA ACCAGAAACC GGCTTCCGTT
CTGCGGAATC TGTAG
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| Protein sequence | MTLAADPLAK SPSTSAPTSR GLSLPLRYAL REMRGGLNGF YVFIACIALG VMAIAGVGSV
AASLGDGLAR EGRTLLGGDV AFSLIQREAT AEELGYLRER GPVSVAATLR GMARTAAGQS
ALVEIKAVDN LYPMLGELKL APQLPTAEVL AERDGAFGAA ADAALLARLD LKIGDRVTVG
SAAFQIRSVV ASEPDKLAGN VGFGPRFLIS DAALRATQLL QPGSLVRWIY RVRLPDNRAD
DKAAQAFADA TRAALPQAGW EIRSRGNASP QLERTITRFT QFLTLVGLAA LLVGGVGVAN
AVKSHIDRRR DVIAAFKALG ATGHDVFAIY LTQVLVLATI GSLIGLALGA ALPFVITGLF
GKLLPLPVVA ALHPEELALS LVYGLLTALA FGLWPLAQVR DVPVATLFRE AATADAHRPK
FRHIVWIGVV IALLLAVVIG LAYDKRVAIA FVVAAVVVFA LLRGVAAGLM AIARWLPRSR
ITMLRLAIAN IHRPGALTPS VVLSLGLGLA VLVTISQIDG NLRRQFLAAL PERAPTFFFI
DIPSSETEQF SGFLTRIAPK ATLEDVPMLR GRIVAARGVR AEDLKPGQDA EWVLQSDRGL
TYAAEMPAGS KVVEGHWWPK DYDGKPLVSF EKKLADGLGL KIGDSVTVNV LGREITATIS
NLRSVDWQSL GINFVLVFSP NTFRGAPHTH IATLTETGST PESDAALIKQ VADKFPMVTS
VRVREALETV GGVVSNLALA VRGASSVTLI SAILVLGGAL AAGHRHRVYD AVILKTLGAT
RGRLIGAFAL EYMMIGLATA VFGVIAGSAA AWLIVTRLMS LSFAWQAGSA AGVVVAALVV
TVGLGLVGTL LALNQKPASV LRNL
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