Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0526 |
Symbol | |
ID | 4020994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 597793 |
End bp | 598629 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637960713 |
Product | hypothetical protein |
Protein accession | YP_567665 |
Protein GI | 91975006 |
COG category | [S] Function unknown |
COG ID | [COG5429] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.680499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGGG CCGCCTTTTC GTTTCAAGGC GTCCGGACGG CGGCTGACGC CCGCTTTGTT CCGCTCCCGG CAAAGGTGAC GATGATCGGT GTAGTTGGCA TTTCGCGATG GTTAGGCGCA CTCGGTCTGT GCGCATTGAT CGCGATGGTG CGGCCCGCCG CAGCCGAACC GCGCGCGGTG GTCGAGCTGT TCACCTCGCA GGGCTGTTCG TCGTGTCCGC CGGCCGATCA GATCATCGGC GACCTGTCGA AGGATCCGTC GGTGATCGCG CTCAGCCTGC CGATCGATTA CTGGGACTAT CTCGGCTGGA AGGACACGCT TGCGGATTCG CGCTTCAGCG CGCGCCAGCG AGCCTATTCG CAGATGCGGG GTGATCGCGA CGTGTACACG CCGCAGGTCG TCGTCAACGG CTCGGCGCAT GTGGTCGGCA GCAATCGGGC CGGCATCGAC GACGCGATCA AGAGCACCGA CAAGGCCACC GGGGTGATGA CGGTGCCGGT GACGATGGCG GTCAACGACA AGGAGATCAA GGTGTCGGTC GCCGCCGCGC CGCCGGGCGA CGGCGAGAGG CGCGGCGAGG TCTGGATCTG CTCGGTGTCG AAGGCGGTGC CGATCGCGAT CACCCGCGGC GAGAATCGCG GACGCGAGGT CACTTATCAC AACGTCGTCC GCACGCTGCT CAAGGTCGGC GACTGGACCG GTGCGGCCGG CAGTTGGTCG GTGCCGCTGG AAAACATCGC GCGGGACGGC ATCGATGCCG CCGCCGTCTA TGTGCAGGAC GGCAGTCGCG ACAGGCCGGG ACCGATGCTC GGCGCGGCCT TCACCTCGCT GCACTGA
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Protein sequence | MQRAAFSFQG VRTAADARFV PLPAKVTMIG VVGISRWLGA LGLCALIAMV RPAAAEPRAV VELFTSQGCS SCPPADQIIG DLSKDPSVIA LSLPIDYWDY LGWKDTLADS RFSARQRAYS QMRGDRDVYT PQVVVNGSAH VVGSNRAGID DAIKSTDKAT GVMTVPVTMA VNDKEIKVSV AAAPPGDGER RGEVWICSVS KAVPIAITRG ENRGREVTYH NVVRTLLKVG DWTGAAGSWS VPLENIARDG IDAAAVYVQD GSRDRPGPML GAAFTSLH
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