Gene RPD_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0526 
Symbol 
ID4020994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp597793 
End bp598629 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content67% 
IMG OID637960713 
Producthypothetical protein 
Protein accessionYP_567665 
Protein GI91975006 
COG category[S] Function unknown 
COG ID[COG5429] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.680499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGGG CCGCCTTTTC GTTTCAAGGC GTCCGGACGG CGGCTGACGC CCGCTTTGTT 
CCGCTCCCGG CAAAGGTGAC GATGATCGGT GTAGTTGGCA TTTCGCGATG GTTAGGCGCA
CTCGGTCTGT GCGCATTGAT CGCGATGGTG CGGCCCGCCG CAGCCGAACC GCGCGCGGTG
GTCGAGCTGT TCACCTCGCA GGGCTGTTCG TCGTGTCCGC CGGCCGATCA GATCATCGGC
GACCTGTCGA AGGATCCGTC GGTGATCGCG CTCAGCCTGC CGATCGATTA CTGGGACTAT
CTCGGCTGGA AGGACACGCT TGCGGATTCG CGCTTCAGCG CGCGCCAGCG AGCCTATTCG
CAGATGCGGG GTGATCGCGA CGTGTACACG CCGCAGGTCG TCGTCAACGG CTCGGCGCAT
GTGGTCGGCA GCAATCGGGC CGGCATCGAC GACGCGATCA AGAGCACCGA CAAGGCCACC
GGGGTGATGA CGGTGCCGGT GACGATGGCG GTCAACGACA AGGAGATCAA GGTGTCGGTC
GCCGCCGCGC CGCCGGGCGA CGGCGAGAGG CGCGGCGAGG TCTGGATCTG CTCGGTGTCG
AAGGCGGTGC CGATCGCGAT CACCCGCGGC GAGAATCGCG GACGCGAGGT CACTTATCAC
AACGTCGTCC GCACGCTGCT CAAGGTCGGC GACTGGACCG GTGCGGCCGG CAGTTGGTCG
GTGCCGCTGG AAAACATCGC GCGGGACGGC ATCGATGCCG CCGCCGTCTA TGTGCAGGAC
GGCAGTCGCG ACAGGCCGGG ACCGATGCTC GGCGCGGCCT TCACCTCGCT GCACTGA
 
Protein sequence
MQRAAFSFQG VRTAADARFV PLPAKVTMIG VVGISRWLGA LGLCALIAMV RPAAAEPRAV 
VELFTSQGCS SCPPADQIIG DLSKDPSVIA LSLPIDYWDY LGWKDTLADS RFSARQRAYS
QMRGDRDVYT PQVVVNGSAH VVGSNRAGID DAIKSTDKAT GVMTVPVTMA VNDKEIKVSV
AAAPPGDGER RGEVWICSVS KAVPIAITRG ENRGREVTYH NVVRTLLKVG DWTGAAGSWS
VPLENIARDG IDAAAVYVQD GSRDRPGPML GAAFTSLH