| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0522 |
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| Symbol | |
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| ID | 4020990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 592442 |
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| End bp | 593176 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637960709 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_567661 |
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| Protein GI | 91975002 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.897478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTGA CCGAACTCGC CAATCCGACC CGGTTCCTGT CGCTCGCGGG CCGCCTGCTG
CCGTGGCTGG CGGGCGCGAC CGCGCTGCTG CTCACCGTCG GGCTGGTGCT GGCGATGCTG
GCGCCGGACG ACTACCAGCA GGGCGCGACC GTGAAGATCA TGTTCGTGCA CGTCCCGAAC
GCCTGGCTGG CGATGTTCGT GTGGGGCGTG ATGAGCCTGG CCTCGCTCGG CACGCTGGTG
TGGCGGCATC CGCTCGCCGA CGTCGCCGCC AAGACCGCCG CCCCGATCGG CGCCGCCTTC
ACCTTCCTGG CGCTGCTGAC CGGCTCGCTG TGGGGCCGGC CGATGTGGGG CACCTATTGG
GAATGGGACG CCCGGCTGAC CTCGATGCTG ATCCTGTTCC TGATGTATCT CGGCCTGATC
GCGCTGTGGC GCGCGGTCGA GGACCCGTCC CGCGCGGCGC GCGCCGCGGC GGTGCTGACG
CTGGTCGGCG CGATCAATCT GCCGATCATC AAATTCTCGG TCGACTGGTG GAATACACTG
CATCAGCCCG CCTCGGTGAT GCGGATGAGC GGCCCGGCGC TGGACAAGGC GTTCCTGTCT
CCGCTGCTGG TGATGGCGGT CGGCTTCTCA CTGCTGTTTC TCACATTGCA CGTCGCCGCG
ATGCGCAACG AGATCCTGCG CCGGCGGGTG CGCACCCTGC AGATGATGCA GGCCAGCCGG
GCCGAGGCGG CGTGA
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| Protein sequence | MTLTELANPT RFLSLAGRLL PWLAGATALL LTVGLVLAML APDDYQQGAT VKIMFVHVPN
AWLAMFVWGV MSLASLGTLV WRHPLADVAA KTAAPIGAAF TFLALLTGSL WGRPMWGTYW
EWDARLTSML ILFLMYLGLI ALWRAVEDPS RAARAAAVLT LVGAINLPII KFSVDWWNTL
HQPASVMRMS GPALDKAFLS PLLVMAVGFS LLFLTLHVAA MRNEILRRRV RTLQMMQASR
AEAA
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