Gene RPD_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0519 
Symbol 
ID4020987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp591159 
End bp591551 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID637960706 
Producthypothetical protein 
Protein accessionYP_567658 
Protein GI91974999 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTT TCAAGCTGCG TACTTTGAAG CTGCGTCATC TCACGCTTGC GCCGCTCGCC 
GCCGCGCTCG CCTTCGGCCT GCTCGTCAAC GCCCCGGCTA TGGCCCAGGC CCCCCAGACC
ACGCCCCAAA CCGACAAGAT GGCGCCGCCG CCGGCCGCGA CCAAGACGTC GCCGACCGCC
GGCGCCAAGT CCGAGAAAGT GGACCTGCTC GACATCAACT CGGCCACCGT GGAGCAGCTC
GAAGTGCTGC CGGGCATCGG CAAGGCCTAT TCGGCCGCGA TCATCAAGGG CCGCCCCTAC
AAGGGCAAGG ACGAGCTGGT GCAGAAGAAG GTCGTGCCCG AGAAGACCTA TGAGGGCATC
AAGGACAAGA TCATCGCCAA GCAGAAAGGC TGA
 
Protein sequence
MRTFKLRTLK LRHLTLAPLA AALAFGLLVN APAMAQAPQT TPQTDKMAPP PAATKTSPTA 
GAKSEKVDLL DINSATVEQL EVLPGIGKAY SAAIIKGRPY KGKDELVQKK VVPEKTYEGI
KDKIIAKQKG