| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0496 |
|---|
| Symbol | |
|---|
| ID | 4020964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 570335 |
|---|
| End bp | 571213 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637960683 |
|---|
| Product | Citryl-CoA lyase |
|---|
| Protein accession | YP_567635 |
|---|
| Protein GI | 91974976 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGAC CGCGCCGCAG CCTGTTGTTC ATGCCGGGGT CGAACGCGCG GGCGCTGGAG
AAGGCCCGGC TGCTGCCCGT CGACGGGCTG ATTCTCGACC TCGAGGACTC GGTGGCGCCG
GAGGCCAAGG CGCAGGCGCG CGATCAGATC GGGCAGGCCG TCGCGGCCAA GGGTTACGGC
CGCCGCGAGG TGCTGGTGCG GATCAACGCG CTGGATTCGC CGTGGTGGCT CGACGACATC
GCGATGGCCG CCAAGGTCAA GCCGGACGGC ATTCTGGTGC CCAAGGTGTC GAGCGTGCAG
GACCTCTCGG CGATCGCCGA TCGGCTCAGC GATCTCAACG CCGACATGTC GATCCGGGTC
TGGATCATGA TCGAGACATC GCGCGGCGTG CTTCACGCCG AGGAGCTGGC GGCGCAGGTC
CACGATTCCG AGACGCGGTT GGCCGGCTTC GTGTTCGGTC CGAACGACAT TTCGCGCGAA
ACAGGCATCC GAATGCTGCC CGGCCGCACC GCGATGATCC CGATGATCAC GCACTGCATC
CTCGCCGCGC GCGTGCACGG CCTGACCGTG CTCGACGGTC CCTACAGCGA CATCGCCAGT
GTCGACGGCT TCGCCCTGGA ATGCGCCCAG GCGCGTGATC TCGGCTTCGA CGGCAAGACG
CTGATTCATC CCGGGCAGAT CGAGGCCTGC AACGCAGCCT TCACCCCGCC GCCCGAGGAC
GTGGCTCAGG CGCGCAAGAT CATCGCCGCG TTCGAGCGCC CGGAAAACGC CGGTCGCGGC
GCGATCCAGC TCGACGGCCG GATGGTCGAG CGGCTGCACG CCGAGATCGC GAAGAAGACC
ATCGCGATCG CCGATGCGGT CGAAACGATG GGGCGTTGA
|
|---|
| Protein sequence | MIRPRRSLLF MPGSNARALE KARLLPVDGL ILDLEDSVAP EAKAQARDQI GQAVAAKGYG
RREVLVRINA LDSPWWLDDI AMAAKVKPDG ILVPKVSSVQ DLSAIADRLS DLNADMSIRV
WIMIETSRGV LHAEELAAQV HDSETRLAGF VFGPNDISRE TGIRMLPGRT AMIPMITHCI
LAARVHGLTV LDGPYSDIAS VDGFALECAQ ARDLGFDGKT LIHPGQIEAC NAAFTPPPED
VAQARKIIAA FERPENAGRG AIQLDGRMVE RLHAEIAKKT IAIADAVETM GR
|
|---|
| |