| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0489 |
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| Symbol | |
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| ID | 4020957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 563283 |
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| End bp | 564467 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637960676 |
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| Product | major facilitator transporter |
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| Protein accession | YP_567628 |
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| Protein GI | 91974969 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCCTGC TCGACCGCAC CGAGGCGCCG GTTCATCCCG CGCGCCTGAT CCTGATCCTG
TCGCTCGCCC CCACAGTGGG ACTTGGGATC GGCCGCTTCG CCTATTCGCT GCTGCTGCCC
GACATGCGGG ACAGCCTGCA ATGGTCGTAT TCGGCCGCCG GCTTCATGAA CACCATCAAT
GCCGCCGGCT ATCTCGCCGG CGCGCTGATC ACCTCGCAGC TGGTTCGGCG TTACGGATTG
TCGGCGATCG TGCGGGTCGG AACGCTCGGC TGCGTGCTGT CGCTGGCGCT GTGTGCGCTG
TCGGGCAATT TCGTGCTGCT GTCGGCGGCG CGGCTGATCG CCGGGATCGG CGCGGCGCTG
GCTTTCGTCG CCGGCGGAGC GCTGGCGACC ACGATCGCGC AGTCGCAGCC ACAGCGCTCG
GCGTTTCTGC TCAGCCTGTT CTATGCCGGC CCCGGCCTCG GCATCCTGTC GTCGGGGCTG
ATCACCCCGT TTCTGTTGCA GGCGGCGGGC CCCGGCTCGT GGTGGATCGG CTGGCTGGTG
ATGGCGGCGC TGTCGGCCGT GATGACGCTG CCGCTTCTGC TCGCGCCGCT CGACAGCCAT
GCCAGCATGA GCGGCGGACC GGCGACGACA TTCTCGATCC GGCCGGTGCT GATCTATCTG
GTCGGCTATT TCATGTTCGG CGCCGGCTAC ATCGCCTACA TGACCTTCAT GATCGCCTAT
GTGCGCGACG CTGGCGGCGG ACCGGCGGCG CAGAGCGCGT TCTGGTGCCT GATCGGGGCG
AGCGCCTTCG TCACCCCGTG GGTGTGGCGC CGGATCATGG CGCTCGACCG CGGCGGGGTG
TCGACCACGA TCATCCTCGC CGTCAACGCG CTCGGCGCGG CGCTGCCGCT GTTCGGACTG
TCGCCGCTGA TCCTGGCGAT CTCGGCGCTG GTGTTCGGCG TGTCGTTCTT CGCCGTGGTG
GCGTCGACCA CCGCCTTCGT CCGCTTCAAT TATGCGCAGG CGGCGTGGCC GGGCGCGATC
GCCGCGATGA CGATTGCGTT CGGGATCGGC CAGACGCTGG GCCCCCTTGC GGTCGGCGCC
ATCACCGACG CAGTCGGCAG CCTGTCCTCG GCGCTCGCGG TCTCCGCCGC CACACTGGCG
CTCGGCGCGG TGTTCTCGGC ATTTCAGCGG CCGTTGAAAC GGTAG
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| Protein sequence | MTLLDRTEAP VHPARLILIL SLAPTVGLGI GRFAYSLLLP DMRDSLQWSY SAAGFMNTIN
AAGYLAGALI TSQLVRRYGL SAIVRVGTLG CVLSLALCAL SGNFVLLSAA RLIAGIGAAL
AFVAGGALAT TIAQSQPQRS AFLLSLFYAG PGLGILSSGL ITPFLLQAAG PGSWWIGWLV
MAALSAVMTL PLLLAPLDSH ASMSGGPATT FSIRPVLIYL VGYFMFGAGY IAYMTFMIAY
VRDAGGGPAA QSAFWCLIGA SAFVTPWVWR RIMALDRGGV STTIILAVNA LGAALPLFGL
SPLILAISAL VFGVSFFAVV ASTTAFVRFN YAQAAWPGAI AAMTIAFGIG QTLGPLAVGA
ITDAVGSLSS ALAVSAATLA LGAVFSAFQR PLKR
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