| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0486 |
|---|
| Symbol | |
|---|
| ID | 4020954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 561057 |
|---|
| End bp | 561701 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637960673 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_567625 |
|---|
| Protein GI | 91974966 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.899419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCA TGACAGTCAG CGAACAGGCC AACGCCGGAC AAGCCGGCGA GGAGACTGTG
CGCAAAGTGA TCCAGCCGGC CTGGGTGCGG ATCATGCACT GGATCAACGC GGTCGCGATG
ATCGTGATGA TCATGTCCGG CTGGCAGATC TACAACGCCT CGCCGTTGTT CGACTTCCAG
TTTTCGCGCA GCGTCACGCT GGGCGGCTGG CTCGGCGGCG GGCTGTTGTG GCACTTCGCG
GCGATGTGGG TGCTGATGAT CAACGGCCTG TTGTATCTTG TCGTCGGTCT CGCCACCGGT
CGGTTTCGCC GCAAGCTGTT GCCGATCACG CCGTCGGGCG TCGCCTCCGA TCTCGCCAAG
GCCGCGACCT TCCGGCTGTC GCACCGCGAT CTCACCACCT ACAACTACGT CCAGAAGCTG
CTCTATGCCG GCATCATGGG GGTCGGCATC GTCGTCGTGC TCTCCGGGCT GTCGATCTGG
AAGCCGGTGC AGTTCCAGCT GCTCACGGCG GTGTTCGGCG GCTACGACAC CGCGCGCTAC
GTGCATTTCT TCGCGATGGC TTCGATCGTG GCGTTTTTGA TCGTCCATAT CGCGCTGGCG
GTACTGGTGC CGAAGAGTCT TCGCGCGATG ATCATCGGGA GATAA
|
|---|
| Protein sequence | MSSMTVSEQA NAGQAGEETV RKVIQPAWVR IMHWINAVAM IVMIMSGWQI YNASPLFDFQ
FSRSVTLGGW LGGGLLWHFA AMWVLMINGL LYLVVGLATG RFRRKLLPIT PSGVASDLAK
AATFRLSHRD LTTYNYVQKL LYAGIMGVGI VVVLSGLSIW KPVQFQLLTA VFGGYDTARY
VHFFAMASIV AFLIVHIALA VLVPKSLRAM IIGR
|
|---|
| |