| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0485 |
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| Symbol | |
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| ID | 4020953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 560248 |
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| End bp | 560832 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960672 |
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| Product | beta-Ig-H3/fasciclin |
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| Protein accession | YP_567624 |
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| Protein GI | 91974965 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGC GAATTGCCTA TCTGTCCGCC GCGGCGCTGA GCGCGCTGGC CCTCACCGCG
ACCGCGATGG CGCCCGCCAA TGCCGAAGAC AAGAAGATGA TGAAGAGCGA GATGAGCGGC
GAGAAGACGG TGATGGTCGG CGGCGCGCCG ATGTATCCGT CGAAGAACAT CGTCGAGAAC
GCCGTCAATT CGAAGGATCA CTCCACGCTG GTCGCCGCTG TGAAGGCCGC CGGCCTCGTC
AAGACGCTGG AAGGCAAGGG TCCGTTCACG GTGTTTGCGC CGACCAACGC CGCCTTCGGC
AAGCTGCCCG CCGGCACCGT CGACACGCTG GTGAAGCCGG AAAGCAAGGC CACGCTGACC
AAGATCCTCA CCTATCACGT GGTCCCGGGC AAGCTCGCGG CGGCCGATCT CACCGACGGC
AAGAAACTGA CCACCGTCGA GGGCGCGACC CTCACCGTGA AGCGCTCCGG CGATCAGGTG
ATGCTGGTCG ACGCCAAGGG CGGCAGCTCG ACCGTGACGA TCCCCAACGT CAACCAGTCG
AACGGTGTGA TTCATGTGGT CGACACCGTG CTGATGCCGT CCTGA
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| Protein sequence | MSKRIAYLSA AALSALALTA TAMAPANAED KKMMKSEMSG EKTVMVGGAP MYPSKNIVEN
AVNSKDHSTL VAAVKAAGLV KTLEGKGPFT VFAPTNAAFG KLPAGTVDTL VKPESKATLT
KILTYHVVPG KLAAADLTDG KKLTTVEGAT LTVKRSGDQV MLVDAKGGSS TVTIPNVNQS
NGVIHVVDTV LMPS
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