| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0339 |
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| Symbol | |
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| ID | 4020799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 393530 |
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| End bp | 394186 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960518 |
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| Product | anti-sigma factor ChrR, putative |
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| Protein accession | YP_567478 |
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| Protein GI | 91974819 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.275978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGTGC GGCATCACAT CGGCGACGAC CTGCTGCTGA GCTATGCGGC GGGCACGCTG
GACGAGGCCT CGAGCCTCCT GGTCGCCACC CATCTCGCGC TGTGTCCGCA CTGCCGCGCC
CGAGCCGCGG CGGCGGATGA TCTCGGTGGC GCGTTGTTCG AGGACCTGCC GGTGGCCGAG
CTGTCGCCTG GGTTGCGCGA CGCGGTGTTG GCGCGGCTGC GCAGCGAATC AGTCGCTGCG
CCCGCGACGA GGCCGCACCG GCCGCGCTCC GACATCGTCA TCCCGGAGCC GCTGCGCAGC
TATCTCGGCG GCGACCTCGA CACGTTGCGC TGGACGTCAG TGGCGCCGCG GGTGCAGCAG
ATCGCGATCG ATATTGCGAA CTGCGGGCCG CGTGCGCGGA TGCTTCGGTT TCAGCCCGGC
ACCCATGTGC CGGCGCACGG TCACGCCGGC CGCGAACTGA CCCTGGTGCT CAGCGGCAGC
CTGTGCGACC GCGACGCCGT GCTGGCGCGC GGCGACGTCG CCGAAACCGA CGAACATACC
GAGCACCAGC CCTACGCCGG GCCGGACAAG GATTGCATTT GCCTTGCCGT CACCGACGCT
CCGCTGCGAT TCAAGGGGAT GTTCGCCCGG ATGCTCCAGC CATGGTTCGG GATCTAG
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| Protein sequence | MTVRHHIGDD LLLSYAAGTL DEASSLLVAT HLALCPHCRA RAAAADDLGG ALFEDLPVAE
LSPGLRDAVL ARLRSESVAA PATRPHRPRS DIVIPEPLRS YLGGDLDTLR WTSVAPRVQQ
IAIDIANCGP RARMLRFQPG THVPAHGHAG RELTLVLSGS LCDRDAVLAR GDVAETDEHT
EHQPYAGPDK DCICLAVTDA PLRFKGMFAR MLQPWFGI
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