Gene RPD_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0335 
Symbol 
ID4020795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp386777 
End bp387850 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content69% 
IMG OID637960514 
Productphospholipase/carboxylesterase 
Protein accessionYP_567474 
Protein GI91974815 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.64094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CCGTGGTCGA CGACATCGTC GCGCTGTTGC CGCCCTTGCT GCAGTCGATC 
GAAGCGCTCG GCTTCATCGC GCGCTATCTG CATCCGCCGG AGTTCGGCGA AGTGATGCGG
CTTGCAGGCG CGCCGGACGC ACAGCTTCGC AGCGAATTGC CGCGGGTCGC GAAATGGCCC
GATCAGTTCG CGCATCTGCG CGAGCCGCTG CGGATGGCGG GCGATCATGC GCTGGCGGCA
TTCGACGGGT TGCGCACGGT CGATTCCGGC GCGGGTGATC TCGGCGCGGT TTTCCGCGCG
CTGCGTCATC TGCCGCAGGC GCTGGAGGCG TTGTATCCGC TGGCGGCGAC GTTGCCGCCG
GTGTCGGGGC TGTATCTCGA CCCGGCGCTG CAACAGGACG AAGCCCTGCA CGCCCGGCTG
GCGCAGCCGA AGCACCCCGA CAGCGGGGTC TTTCACTACG CCAACGAGCC GGGCAGTCGC
GGCGGCTTCT CGTTCTACGT GCCCGAATAC TACACGCCGG ACCGCGCCTG GCCGCTGGTG
GTGGCACTGC ATGGCGGCAG CGGCAATGGC CGGCTGTTTC TATGGAACTG GCTGCGCGAC
GCCCGCAGCC GCGGCGCCAT CGTGGTCGCG CCGACCGCGA CGGGACGGAC ATGGGCGCTG
ATGGGCGACG ATGCCGACAC GCCGAACCTC GCGCGCATCG TCGATTTCAT CCGCTCGCGA
TGGTCGATCG ACCCGGAGCG GCTGCTGGTC ACCGGGCTCA GCGACGGCGG CACGTTCTGC
TACGTCACGG GCCTCGACGA CGCGTCGCCC TTCACCCATC TCGCGCCGAT CGCCGCGAGC
TTCCATCCGC TGCTGGCCGG CATGGCCAGC GTCGACCGGC TGCGCGGCCT GCCGATCCAG
ATCGTGCACG GCCGGCACGA CTGGATGTTC CCGGTCGAGC TGGCGCGGCA GGCGCAGCAG
GCGCTGTTCA AGGCCGGCGC CGATGTGAGC TATCGCGAGA TCGCGGATCT CAGCCACACT
TATCCGCGCG AACTCAACGC GGCGCTGCTC GACTGGCTGA ACGGCGCTGG ATGA
 
Protein sequence
MSDAVVDDIV ALLPPLLQSI EALGFIARYL HPPEFGEVMR LAGAPDAQLR SELPRVAKWP 
DQFAHLREPL RMAGDHALAA FDGLRTVDSG AGDLGAVFRA LRHLPQALEA LYPLAATLPP
VSGLYLDPAL QQDEALHARL AQPKHPDSGV FHYANEPGSR GGFSFYVPEY YTPDRAWPLV
VALHGGSGNG RLFLWNWLRD ARSRGAIVVA PTATGRTWAL MGDDADTPNL ARIVDFIRSR
WSIDPERLLV TGLSDGGTFC YVTGLDDASP FTHLAPIAAS FHPLLAGMAS VDRLRGLPIQ
IVHGRHDWMF PVELARQAQQ ALFKAGADVS YREIADLSHT YPRELNAALL DWLNGAG