| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0330 |
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| Symbol | |
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| ID | 4020790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 383067 |
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| End bp | 384146 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960509 |
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| Product | putative ammonia monooxygenase |
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| Protein accession | YP_567469 |
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| Protein GI | 91974810 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3180] Putative ammonia monooxygenase |
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| TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.328581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCAGA ATTCCGCGTT GACCGCCCCG AGCCTGCGGT CGAGAACCCT GAACGTACTC
GAAACGATCG CGATCGGCGC TGCCGGTGGC GGGCTGTCTT ATTGGGTGCA GCTCCCCGGC
GGGCTGATCA CCGGCGCGAT GGTCGCGGTC GCCGCCGCGG GCCTGGCTGG TCGCAACATG
GGCCTGCCGC CGCCGTTGTC CCATATCGTT CTGATGGCGC TTGGCGTCTC GCTCGGCTCG
ATGGTCTCGC CGGCGATGAT CCACAACCTC AGTTCCTACC CGGTGACGAT CGGGCTGCTG
GCGATCGCTA CCTTCTTCGC CACCTTCGGC AGCGCGATCT ATCTGCAGCG GATTCATGGT
TGGGACCGCA CCTCGGCGCT GCTCGCCGGC AGCCCGGGGG CGCTGTCGCA GATCATCATG
CTGGCCACCG AGCGCAAGGC CAATGTGCCG GGCATCGCCG TCGTGCAGAT CATGCGGGTG
ATCATCCTGA CCAGCGCGGT GCCGATGCTG CTGGCGATGA CCGGGATGAT GGCGCACGGC
CCGCTGCCGG TGCGCGGACC GGAGGCAACG CCGCTGGTGC TGGCCGCAGT TGTCGCGGTC
GCGGTCGCGG CGGCGCTGCT GCTGCGTCTT ATCAATTTTC CGGCGAGCTG GATGTTCGGC
GCGATGCTGG GCTCTTCGGT GCTGCACGGA TCCGGGTTGG TCGAGGGCAC GCTACCCGAA
TGGGCCTATC TGTCGGCGCT GGTCGGGATC GGCACGCTGA TCGGATCGCG GTTCGGCGCG
ATCAAGTTGC GCACCATCCT CAGCTATCTC GGCGCGGCGC TCGGCTCGTT CGCGGTTGCC
ATCGCGATCT CGGGGGTCTT CGTCGTCACC ATTATCCTGA CCACGCCGGT GCGGCTCAGC
GATGTTGTGG TGGCGTTCTC GCCCGGCGCG ATGGATGCGA TGATGGCGCT GGCGCTGACG
CTGAACATCG ATCCGGTGTT CGTCGGCGCG CATCATCTGT CGCGCTTCAT CTATGTCTCG
ATCGTGACGC CCGGCATCGT CCACTGGTTC GGCCGCAGCC CGGACGATCT CGACGACTGA
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| Protein sequence | MSQNSALTAP SLRSRTLNVL ETIAIGAAGG GLSYWVQLPG GLITGAMVAV AAAGLAGRNM
GLPPPLSHIV LMALGVSLGS MVSPAMIHNL SSYPVTIGLL AIATFFATFG SAIYLQRIHG
WDRTSALLAG SPGALSQIIM LATERKANVP GIAVVQIMRV IILTSAVPML LAMTGMMAHG
PLPVRGPEAT PLVLAAVVAV AVAAALLLRL INFPASWMFG AMLGSSVLHG SGLVEGTLPE
WAYLSALVGI GTLIGSRFGA IKLRTILSYL GAALGSFAVA IAISGVFVVT IILTTPVRLS
DVVVAFSPGA MDAMMALALT LNIDPVFVGA HHLSRFIYVS IVTPGIVHWF GRSPDDLDD
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