| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0315 |
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| Symbol | |
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| ID | 4020774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 362564 |
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| End bp | 364216 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960493 |
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| Product | Na+/H+ antiporter |
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| Protein accession | YP_567454 |
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| Protein GI | 91974795 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.764817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTCG TCGCCGGTCC ATTCCACCAA CGACATTGCG GTTTCGTGGA AGCGAAATTC
CTGATCTTCC TGATCTTGCT CGCGGTGCTG GCGGGGACCG CGCTATTGGC GCGGCGTTTT
CACGTAGCGC CGGCGATCCT GCTGCTGCTG GCCGGCATCG TGCTGGCGTT CATTCCCGGA
ATGCCCGCGA TCCAGTTGCC GCCGGACCTG ATCCTGCTGC TGGTGCTGCC GCCGCTGATC
TATTCGGCGA GCGTCGCAAT GAGCTGGCGC GAGTTCCGTT CCAACCTGCG GCCGATCGGC
CTGCTGGCGA TCGGCTGCGT GATCTTCACC GCCTGCGCGG TCGCGGTGGC GACGCACTAT
CTGCTGGGCC TGTCGTGGAG CGTCGGCTTC CTGCTCGGCG CGATCGTCGC GCCGCCCGAC
GTCGTTGCCC CGCTGGCGAT TGCGCGCAAA CTCGGCCTGC CGCGCCGGAT CATCGTGGTG
CTGGAGGGCG AGGGGCTGGC CAACGACGCC ACCGCGCTGA TCCTGTACCG CTTCGCGCTG
GCCGCGATCA TGACCGGTGT GTTTTCCCTG CCGAAAGCAT CCGGCACCTT TGCCGCGATC
ATGGTCGGCG AGCTGGCGTT CGGGGTCGCC GTCGGCTGGC TCAGCCTGCG CGCCCGGCAC
TACGCGCGCG ACCCGCAGAT CGAGATCACG CTGTCGCTGC TGACGCCTTA CATCGCCTAC
TGGATCCCGG AGCATCTCGG CGGCTCCGGC GTGATCGCCA CGGTGGCGTG CGGGCTGTAC
ATTTCGTGGA ACGGGCCGCT GCTGATCCCG GCGGCGACAC GGCTGCAGGG CATCTTCTTC
TGGGATTTGG TGATCTATCT GATCGAGGGG CTGCTGTTCC TGCTCACCGG CTTCCAGATG
CGCGCGATCC TGGAGCGATC GAAGGCGTTT CCGCTCGATG ACATTGTGGC GGCGACGCTG
CTGGTGGCGG CGATCGTCAT CGTCGCGCGT TTCCTGTGGG TGTTTCCGGC GTCCTATCTA
CCGCGGATTC TGAGCAAACG GCTGCGCATC AGTGATCCGT CTCCGCCGTG GCGCGCGGTG
TTCGTGGTCG CCTTCACCGG CGTACGTGGC GCGGTGTCGC TCGCCACCGC TCTGGCGCTG
CCGTTCACGC TGCCGGACGG CTCCGGCTTT CCCGATCGCG ATCTGATCCT GTTCGTGGCC
TTCGGCGTCA TCCTGATCAC GGTGGTCGGG CTCGGCTCGA CACTGCCGGC GGTGGTGATG
GCGCTCGGCG TCGCCCGCGA CGGCCAGAGC GAGCACATCG CCGAACACGA AAACGAGATC
GCGGCGCGGC GCGAGGCGTT GTCGGCCGCG CTCGCCTCGC TCGATGCGAT GACCAATGAT
CGCGAATTGT CCGACGAGGT GGTGACGCTG CTACGCGCGC GACACGACAT CCGCGCCAAT
CAGCTCCCGG CGTCGCTCGA CGACGAGGCC TATGCGGTGA CCGCTGATGA GCGGGCGCTG
GTGCGCGAAC TGATCGCGGC CGAGCGCCGT TTCATTCACG CCCAGCTCCG CGACGGCAAG
ATCACCGACG AAGCCCGCCG CCGGATCGAG CGCGACCTCG ATCTGGAAGA AGCGAGCCTC
GCCAACCGGG AGTTTCGCAA GGGCGCGCAG TAA
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| Protein sequence | MQVVAGPFHQ RHCGFVEAKF LIFLILLAVL AGTALLARRF HVAPAILLLL AGIVLAFIPG
MPAIQLPPDL ILLLVLPPLI YSASVAMSWR EFRSNLRPIG LLAIGCVIFT ACAVAVATHY
LLGLSWSVGF LLGAIVAPPD VVAPLAIARK LGLPRRIIVV LEGEGLANDA TALILYRFAL
AAIMTGVFSL PKASGTFAAI MVGELAFGVA VGWLSLRARH YARDPQIEIT LSLLTPYIAY
WIPEHLGGSG VIATVACGLY ISWNGPLLIP AATRLQGIFF WDLVIYLIEG LLFLLTGFQM
RAILERSKAF PLDDIVAATL LVAAIVIVAR FLWVFPASYL PRILSKRLRI SDPSPPWRAV
FVVAFTGVRG AVSLATALAL PFTLPDGSGF PDRDLILFVA FGVILITVVG LGSTLPAVVM
ALGVARDGQS EHIAEHENEI AARREALSAA LASLDAMTND RELSDEVVTL LRARHDIRAN
QLPASLDDEA YAVTADERAL VRELIAAERR FIHAQLRDGK ITDEARRRIE RDLDLEEASL
ANREFRKGAQ
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