Gene RPD_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0287 
Symbol 
ID4020746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp333223 
End bp334218 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content63% 
IMG OID637960467 
Productcobalt chelatase, pCobS small subunit 
Protein accessionYP_567428 
Protein GI91974769 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID[TIGR01650] cobaltochelatase, CobS subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.300269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CCACGACCAG AGCCCAGGAG ATCACCGGCC TGCCCGACAT GAAGGTGTCG 
GTCCGGCAGG TCTTCGGCAT CGACAGTGAC CTTGAAGTTC CAGCCTTTTC GGAGGCCGAT
CCGCATGTGC CGGATGTCGA CAGCGACTAT CGTTTCGACC GCGCCACCAC GCTCGCGATC
CTCGCCGGCT TCGCCAGGAA TCGCCGCGTC ATGGTCACCG GCTTTCACGG CACCGGCAAA
TCGACCCATA TCGAGCAGGT CGCCGCCCGG CTGAACTGGC CCTGCGTCCG GGTCAATCTC
GACAGCCACA TCAGCCGTAT CGACCTTGTC GGCAAGGACT CGATCGTGGT GCGGGACGGC
AAGCAGGTCA CGGAATTCCG CGACGGCATC CTGCCTTGGG CGCTGCAGCA CAATGTGGCG
CTGGTGTTCG ACGAATACGA CGCCGGCCGC CCGGACGTGA TGTTCGTGAT CCAGCGGGTG
CTGGAAGTCT CCGGCCGGCT CACGCTGCTC GATCAGAACA AAGTGATCAA GCCGCATCCG
GCGTTCCGGC TGTTCTCGAC CGCCAACACG ATCGGCCTCG GCGACACTTC GGGCCTGTAT
CATGGCACCC AGCAGATCAA CCAGGGCCAG ATGGACCGCT GGTCGATCGT CACCACGCTG
AACTATCTGC CGCATGACGA GGAAGTCGAG ATCGTGCTGG CCAAGGCCCG GCACTATCGC
AACGCGGAAG GGCGCGAGAT CGTCAACAAG ATGGTGCGGC TCGCCGACCT CACCCGTAAC
GCCTTCGCCA ATGGCGATCT GTCGACGGTG ATGAGCCCGC GCACGGTGAT CACCTGGTCG
GAGAACGCCG AAATCTTCGG CGACATCGGC TTCGCGTTCC GCGTCACCTT CCTCAACAAA
TGCGACGAGC TGGAGCGCCC GCTGGTGGCG GAGTTCTATC AGCGCTGCTT CAACGCCGAG
CTGCCGGAAA GCTCGGTCAA TGTCGCAATG AGCTGA
 
Protein sequence
MTAATTRAQE ITGLPDMKVS VRQVFGIDSD LEVPAFSEAD PHVPDVDSDY RFDRATTLAI 
LAGFARNRRV MVTGFHGTGK STHIEQVAAR LNWPCVRVNL DSHISRIDLV GKDSIVVRDG
KQVTEFRDGI LPWALQHNVA LVFDEYDAGR PDVMFVIQRV LEVSGRLTLL DQNKVIKPHP
AFRLFSTANT IGLGDTSGLY HGTQQINQGQ MDRWSIVTTL NYLPHDEEVE IVLAKARHYR
NAEGREIVNK MVRLADLTRN AFANGDLSTV MSPRTVITWS ENAEIFGDIG FAFRVTFLNK
CDELERPLVA EFYQRCFNAE LPESSVNVAM S