Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0285 |
Symbol | |
ID | 4020744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 330097 |
End bp | 331176 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637960465 |
Product | hypothetical protein |
Protein accession | YP_567426 |
Protein GI | 91974767 |
COG category | [S] Function unknown |
COG ID | [COG4246] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.106647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCACTG GCGACGGCGG GGCCGCAGCG GGGCGGTTGC TCAGCCGCCG CCGCGTCGTC GCACTCGCCG CGGGTCTCGC TTTCGCGGCG CACCCGGCGC TGGCGCAGAG CCAAGCGCAG CGCTTCGATC CGGAGGAATT CTCCACCCCG GCCCCCGAGC GCATCGAGGT GCGGGCGCGG CCGATCGAGT CCTTCGATCT CCGCGACCGC GCCAGCCGAC GGTTCGGCGC GCTGCAGTTT CGCAGCGGTC TGGTGCTGAC CTCGCCGTTC CGCGGCTTCG GCGGCCTGTC GGGGCTGAAG CTCGATCCGA AAGGCGAGCG CTTCGTCGCG ATCAATGACC GCGGCGCCTG GATCACCGGC CGCATCGTGT ACAGCGGCGC CGAGATGACC GGGCTCGCCG ACGTCGAGGC GGCGCCGCTG CTCGGCCCCG ATGGACAGCC GCTGACGCGG CGCAAATGGT ACGATAGTGA ATCGCTCGCA TTCGACGGCG GCACAGCCTA TGTCGGCTTC GAACGCGTCA ACCAGATCGT GAAATTCGAC TTCGGCCGCG ACGGCGTCCG GGCGTTGGGG CAGCCGATCG CGGTGCCGCC GGCGCTGCGC AAATTGCCGA ACAACAAGGG CATCGAATCG CTGGTGGCGG TGCCGAAGGG CCAGCCGCTG GCCGGAACGC TGATTGCGAT CTCCGAGCGT GGTCTCGACG CCGATCGCAA CGTCATCGGC TTTCTGATCG GCGGAAAAAC CCCTGGCCAG TTCGCGGTTC GCCGCACCGA GGATTTCGAC ATCAGCGATG CGATGCTGCT ACCATCGGGC CAATTGCTGA TCCTCGAGCG CAAGTTCTCC TGGATCCACG GCGTGCACAT CCGGATCAGG CGGATCGCGC TGTCGACGCT GACGCCCGGC GCGATCGTCG ACGGCCCCGC GCTTTTCAAC GCCGATCTAG GCCACGAGAT CGACAACATG GAAGGCATCG ACGCGCATCT CGACGCGTCC GGCGCCACCG TGCTGACGCT GGTCTCGGAC GACAATTTTT CGATGCTGCA GCGGACGTTG CTGTTGCAGT TCACCCTCGT CGAGGATTGA
|
Protein sequence | MTTGDGGAAA GRLLSRRRVV ALAAGLAFAA HPALAQSQAQ RFDPEEFSTP APERIEVRAR PIESFDLRDR ASRRFGALQF RSGLVLTSPF RGFGGLSGLK LDPKGERFVA INDRGAWITG RIVYSGAEMT GLADVEAAPL LGPDGQPLTR RKWYDSESLA FDGGTAYVGF ERVNQIVKFD FGRDGVRALG QPIAVPPALR KLPNNKGIES LVAVPKGQPL AGTLIAISER GLDADRNVIG FLIGGKTPGQ FAVRRTEDFD ISDAMLLPSG QLLILERKFS WIHGVHIRIR RIALSTLTPG AIVDGPALFN ADLGHEIDNM EGIDAHLDAS GATVLTLVSD DNFSMLQRTL LLQFTLVED
|
| |