Gene RPD_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0280 
Symbol 
ID4020739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp320879 
End bp321148 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content66% 
IMG OID637960460 
ProductRNA-binding S4 
Protein accessionYP_567421 
Protein GI91974762 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.16081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCGTC AGCGTCTCGA TAAATGGCTG TGGCACGCGC GGGTGGTGCG CGCCCGCAGC 
GCCGCGGCGG CCTTGGTGGA AAGCGGTCAC GTCCGCATCA ATGGCGCGCG CGAGAAGTCG
CCCGGACATG CGATCAAAGC CGGCGACGTC GTAACGATTG CGCTAGATCG TGGTGTGCGG
GTGCTGAAGG TGGTTGGATT CACAGAGCGC CGCGGCGATG CCGCCTCGGT CACTGGACTT
TATGCCGATC TCTCGGTGCC GCGAGACTAG
 
Protein sequence
MERQRLDKWL WHARVVRARS AAAALVESGH VRINGAREKS PGHAIKAGDV VTIALDRGVR 
VLKVVGFTER RGDAASVTGL YADLSVPRD