| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0174 |
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| Symbol | |
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| ID | 4020631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 198454 |
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| End bp | 199068 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960352 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_567315 |
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| Protein GI | 91974656 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCC GTCTGCATCG CGGCGATCTG CCGGATCTTT CGCGCTATAC AAATTCGGTG
GCGATCGACA CTGAGACGAT GGGGCTGCAT CCGCATCGCG ACCGGCTTTG CGTGGTGCAA
CTGTCGAACG GCGACGGCAG CGCCGACGTG GTGCAGATTC CGCAGGGACA CTCCGACGCG
CCGAATCTGA AGAAGCTGCT CGGCGATCCG ACCGTCGTGA AGATCTTCCA TTTCGCGCGG
TTCGATCTCG CAGCGCTGTA CAACGCGTTC GGGGTGATGC CGCAGCCGGT CTACTGCACC
AAGATCGCCT CGCGGCTGAC CCGCACCTAC ACCGACCGCC ACGGCCTGAA GGATCTGGTG
CGCGAGCTGC TGAACGTCGA CTTGTCGAAA CAGCAGCAAT CCAGCGACTG GGGCGCGGAG
ACGCTGAGCG ACGCCCAGCT CGCTTATGCG GCCTCCGACG TGCTGCATCT TCACGGGCTG
CGCGAAAAGC TGGACGCGAT GCTGGCGCGG GAGAACCGGA CCGATCTGGC CCAGGCCTGC
TTCGGTTTCC TGCCGCACCG CTCCCGGCTC GACCTCGACG GCTGGAGCGA AGAGGATATC
TTCGCGCATT CTTGA
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| Protein sequence | MTIRLHRGDL PDLSRYTNSV AIDTETMGLH PHRDRLCVVQ LSNGDGSADV VQIPQGHSDA
PNLKKLLGDP TVVKIFHFAR FDLAALYNAF GVMPQPVYCT KIASRLTRTY TDRHGLKDLV
RELLNVDLSK QQQSSDWGAE TLSDAQLAYA ASDVLHLHGL REKLDAMLAR ENRTDLAQAC
FGFLPHRSRL DLDGWSEEDI FAHS
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