Gene RPD_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0143 
Symbol 
ID4020599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp161499 
End bp161972 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content69% 
IMG OID637960320 
Producthypothetical protein 
Protein accessionYP_567284 
Protein GI91974625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG AACAGATCGC GCCCGTGGTC GATCGCGAGG CGCTGCTGCC CGGCGCGCAA 
TTCATCGACG CCTACAGCGT CACGATCGGC GACAATGCGC TCGACGCCCG CGAGGCCGCG
ACCCGGATGG TCGAGCACGG GCCGCGCTGG ATCGGCACGC TGATGCGGCT GCGCAATATC
GTGGTGACGC CGTTCGGACT GAAGACCCCG GCGCCGGGCG GATCGGCGCG CGGCGACCGC
ATCGGCTCCT TTCCGGTGCT GAGCGAAACC CCGACCCGGA TCGTCGCCGG CTTCGACGAC
AGCCATCTCG ACTTCCGCAT CGTGGTCGAT GTCGTCGACG GCGCGGCCGG CCGCCGCGTC
ATCGCCTCGA CATTGGTGCT GACCCATAAT CGGCTCGGCC GGACCTATCT GGCGGCCATC
ATGCCGTTTC ACCGCCTCGT GGTGCGCGCG ATGCTCGGTC GGGTTGCGCA ATGA
 
Protein sequence
MTVEQIAPVV DREALLPGAQ FIDAYSVTIG DNALDAREAA TRMVEHGPRW IGTLMRLRNI 
VVTPFGLKTP APGGSARGDR IGSFPVLSET PTRIVAGFDD SHLDFRIVVD VVDGAAGRRV
IASTLVLTHN RLGRTYLAAI MPFHRLVVRA MLGRVAQ