Gene RPD_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0086 
Symbol 
ID4020541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp101293 
End bp101613 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content67% 
IMG OID637960263 
Producthypothetical protein 
Protein accessionYP_567227 
Protein GI91974568 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.643504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0317187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TCCTCGGCAT GATGAAACAG GCGGCGCAGC TGCAGTCGAA GATGAAGGCG 
ATGCAGGCGG AACTCGACCA GATCGAGGTC GAGGGCTCGT CCGGCGGCGG CCTCGTCCAG
GTGCGGATGA GCGCGAAGAT GGAAGTGCGC GGGGTCTCGA TCGACCCGTC GCTGCTGAAG
CCCGACGAGG GCGGAGTGCT GGAAGATCTT CTGGTTGCGG CGCATGCCGA CGCGCATCGC
AAGGCGGAGG CCGCGATGCA GGAGAAGATG CAGGCGCTGA CCGGCGGCCT CGGCCTGCCG
CCCGGCCTCG GCCTGGGTTA G
 
Protein sequence
MADFLGMMKQ AAQLQSKMKA MQAELDQIEV EGSSGGGLVQ VRMSAKMEVR GVSIDPSLLK 
PDEGGVLEDL LVAAHADAHR KAEAAMQEKM QALTGGLGLP PGLGLG