Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0086 |
Symbol | |
ID | 4020541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 101293 |
End bp | 101613 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637960263 |
Product | hypothetical protein |
Protein accession | YP_567227 |
Protein GI | 91974568 |
COG category | [S] Function unknown |
COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.643504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0317187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TCCTCGGCAT GATGAAACAG GCGGCGCAGC TGCAGTCGAA GATGAAGGCG ATGCAGGCGG AACTCGACCA GATCGAGGTC GAGGGCTCGT CCGGCGGCGG CCTCGTCCAG GTGCGGATGA GCGCGAAGAT GGAAGTGCGC GGGGTCTCGA TCGACCCGTC GCTGCTGAAG CCCGACGAGG GCGGAGTGCT GGAAGATCTT CTGGTTGCGG CGCATGCCGA CGCGCATCGC AAGGCGGAGG CCGCGATGCA GGAGAAGATG CAGGCGCTGA CCGGCGGCCT CGGCCTGCCG CCCGGCCTCG GCCTGGGTTA G
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Protein sequence | MADFLGMMKQ AAQLQSKMKA MQAELDQIEV EGSSGGGLVQ VRMSAKMEVR GVSIDPSLLK PDEGGVLEDL LVAAHADAHR KAEAAMQEKM QALTGGLGLP PGLGLG
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