| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0074 |
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| Symbol | |
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| ID | 4020529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 89967 |
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| End bp | 90668 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960251 |
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| Product | pyrimidine 5-nucleotidase |
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| Protein accession | YP_567215 |
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| Protein GI | 91974556 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0135144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAGC TCTCGAAGCG CGGCTTCGGC CATGTCGACA CCTGGGTGTT CGACCTCGAC
AACACGCTGT ATCCGCATCA CGTCAATCTG TGGCAGCAGG TCGACGGGCG GATTCGCGAT
TTCGTCGCCG ACTGGTTGAA GGTGACGCCG GAGGAGGCGT TCCGGATCCA GAAGGATTAC
TACAAGCGCT ACGGCACCAC GATGCGCGGG ATGATGAGCG AGCACGGCGT CAGCGCCGAC
GACTACCTCG CTTACGTGCA CGCGATCGAC CATTCGCCGC TCGAGCCCAA TCCGGCGATG
GGCGCCGCGA TCGCGCAATT GCCGGGCCGC AAGTTGATCC TGACCAACGG CTCGACCGAT
CACGCCGGCA AGGTGCTGGA GCGGCTCGGC ATCGGCCATC ATTTCGAGGC GGTGTTCGAC
ATTGTCGCCG CCGAGCTCGA ACCGAAGCCG GCGGCGCAGA CCTATCACCG CTTCCTGACG
CTGCACGGCG TCGATCCGGC GAGGGCTGCG ATGTTCGAGG ACCTCGCCCG CAATCTCGCA
GTGCCGCACC AGCTCGGCAT GACCACGGTG CTGGTCGTGC CGGATGGTAG CAAGGACGTG
GTGCGCGAGG ACTGGGAGCT CGAAGGCCGC GACGCCGCCC ATGTCGATTA CGTCACCGAG
GATTTGACCG GATTTCTGGC GGGGTTGAAC GAAGCGGTAT GA
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| Protein sequence | MTELSKRGFG HVDTWVFDLD NTLYPHHVNL WQQVDGRIRD FVADWLKVTP EEAFRIQKDY
YKRYGTTMRG MMSEHGVSAD DYLAYVHAID HSPLEPNPAM GAAIAQLPGR KLILTNGSTD
HAGKVLERLG IGHHFEAVFD IVAAELEPKP AAQTYHRFLT LHGVDPARAA MFEDLARNLA
VPHQLGMTTV LVVPDGSKDV VREDWELEGR DAAHVDYVTE DLTGFLAGLN EAV
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