| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0073 |
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| Symbol | |
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| ID | 4020528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 88816 |
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| End bp | 89970 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960250 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_567214 |
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| Protein GI | 91974555 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5480] Predicted integral membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00557733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGGGCG CAAAGGCCAC CAGTTCGTGT CCCGGGCGCG GCGCAGCACG AAGTGCTGCA
CCGCAGACCC GGGACCCCGG TTCGGCTGAG CCACACAAAC CGGGACCCCG GATCATCAGC
GCACCACGCC GCGAAGGGCG GCGCGCTGCG CTGCATCCGG GGCACGCTTG TCTTTTCGTC
GCAACACTAC TCGCATCATT GGCTGGCAAC ACCGCCGCCC ATGCCGACCT CAAGCTCTGC
AACCGCATGA GCTATGTGAT CGAGACCGCG ATCGGGATCG ACGACAAGGC GACGACCGCG
ACGCGCGGCT GGCTCCGGAT CGATCCGGCG CAATGCCGCG TCGTGCTGCA AGGGGCGCTG
AGCGCCGATC GGGTGATGCT GCATGCCCGC GCGCTCGCGG TTTACGGCGC GTCGCCGATC
CCCCAGAACG GCACTGACCG ACTATGTATC ACGCCGGAGA ACTTCGTGAT CGCCGCCGCA
CGGCAGTGCC GCAGCGGCCA GACGCTGGCG CCGTTCACCG AGATCAAGCC GACGCAGCAG
GACGACGGCA ACATGGTCGC GTACCTCGCA GAGGACAGCG AATATGACGA CGAGCAGGCC
AGGCTCGCGG CGATCCAGCG GCTGCTGGTG ATCGCGGGCT ACGACGCCGC CCCGATCGAC
GGCGTCGATG GCCCGAAGAC GCAAGCCGCG CTCGCCGCGT TCCTGAAAAG CCGCGGCCTC
AAGCCTGACA TCGTCAGCGC GCCGGACTTC TTCGACACCA TGATCAAGGC GGTGGAGTCG
CCATCGGCGA CCGGCCTGAC CTGGTGCAAC GACACCAGGA GCAGGATCAT GGCCGCGATC
GCCGAGGACG ACGGCAAGAC CATCACCAGC CGCGGCTGGT ACCGGATCGA GCCGGGCAAA
TGCCTACGTC CCGACCTCAG CGCCCTGCCG AAGCGGGTGT TCAGCTTCGC CGAAGCGGTC
GACGGCAATG CACGCCCGAT CACCCTCAAG GACAAGCCGC TCAACTGGGG CGGCGCGACG
CTGCTGTGCA CGCGCGAGAG CAAATTCGAG ATCAGCGAGC AGGGCGACTG CTCGGCGCGC
GGACTGAACG CCACCGGCTT TGCGCCGGTC GACCTCTCCG GCGGCGGCAA GACAGTGCGG
TTTGCGACGC CATGA
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| Protein sequence | MTGAKATSSC PGRGAARSAA PQTRDPGSAE PHKPGPRIIS APRREGRRAA LHPGHACLFV
ATLLASLAGN TAAHADLKLC NRMSYVIETA IGIDDKATTA TRGWLRIDPA QCRVVLQGAL
SADRVMLHAR ALAVYGASPI PQNGTDRLCI TPENFVIAAA RQCRSGQTLA PFTEIKPTQQ
DDGNMVAYLA EDSEYDDEQA RLAAIQRLLV IAGYDAAPID GVDGPKTQAA LAAFLKSRGL
KPDIVSAPDF FDTMIKAVES PSATGLTWCN DTRSRIMAAI AEDDGKTITS RGWYRIEPGK
CLRPDLSALP KRVFSFAEAV DGNARPITLK DKPLNWGGAT LLCTRESKFE ISEQGDCSAR
GLNATGFAPV DLSGGGKTVR FATP
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