Gene RPD_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0017 
Symbol 
ID4020471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp23030 
End bp23581 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID637960193 
Producthypothetical protein 
Protein accessionYP_567158 
Protein GI91974499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.131831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCAAA ATCCTTCGAC GAGCGCCTGG CAGGCCGCCC TGGTCGCCCG GCACCCCAAC 
GCCTTCAACG TCGAATTCAA CGGCCGGATC ACCACGCCAG GCTACCCGTC AGTCGGCGAT
GGCTGGCGTG AGCTTGTAGA GACTGCAGTC GGCCGCATGG TCGAGGCGGC AGCACCTCGT
GGCTCGGTCA CGATTGTCCA GATCAAGGAG AAGTTCGGCG GGCTTCGGAT CTACTGGCAC
GGCAGGAATC TGAGCGCGGT GTCCACCCGG GCGATCGAGG AGGCGGTCGC ACTGGCCGAG
GCCCGCTCAG CCTGCACCTG CGAAGTTTGC GGCGCAGAAG GCAGGCTGCA CAAGCACGGA
GGTTGGTTTG CAACGGCGTG CCCCGAGCAC GCGCGTGGCG ATCCGGTCCG CGTCAAACCC
GGCTTCGACA ACATCCGCAT CGTGCGGTCC TTCGAGCCGG GCAAGCCGCC GATCCTGTCC
TGCCGGCGCT ACGACCGCGC CACCGACACC TTCGTCGACG TCGACCCGGC GTCTCTCGGC
ATCAAGGAGT GA
 
Protein sequence
MTQNPSTSAW QAALVARHPN AFNVEFNGRI TTPGYPSVGD GWRELVETAV GRMVEAAAPR 
GSVTIVQIKE KFGGLRIYWH GRNLSAVSTR AIEEAVALAE ARSACTCEVC GAEGRLHKHG
GWFATACPEH ARGDPVRVKP GFDNIRIVRS FEPGKPPILS CRRYDRATDT FVDVDPASLG
IKE