| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0012 |
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| Symbol | |
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| ID | 4020466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 13025 |
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| End bp | 15799 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637960188 |
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| Product | helicase-like protein |
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| Protein accession | YP_567153 |
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| Protein GI | 91974494 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGA AGCCGCTGGG CCGCTCGACT GGTCTAGTTG GAGGCGGCAA CCTTCAGCGG
TTTTCGTCCC GGCTGGGTCG GCTTTCTCAC GTCTACCTTA AGGACCAGCT TAGGGGCGCC
TCAGAGTACC GACGAATCGC CGGGTACTTC AGGTCGTCGA TCTTCGATTT GGTCAACGAA
GAGATTGAGG GGATCGGGAA AGTCCGGATC GTCTGCAATT CGGATCTTGA TCCCGAAGAC
ATCAATGCTG CCAAGCAGGC CCGGACCCAG CTTCTCAAGG AGAAGTGGAA CGAAGTCGAC
GACGCGGTTG AGAGCTTTTT CCGAAGGCCG CGGTATCAGC GGTTGTTCGA TATCCTCACC
AAGGGCAACG TCGAAATCCG GGTCGTGTCG AGGGCGGACG CCCCGTTCGT CCACGGCAAG
GCCGGCGTCA TCTACAGACC GGATGGGACC TCATCGGCCT TCATGGGGAG CCTGAACGAG
ACACGGGAGG GCTGGTCGGC CAATTACGAG TTCGTCTGGG AGGACACCTC GGCCGACGGC
GTGGCCTGGG TCGAGGACGA GTTCGAATAT CTCTGGGAGC GCGGGAAGCC GCTTCCGGAC
GCCATCATTG AGGAGATCGG CAGGAGCGCC CGGCGCGTCG AGGTCCAGTT GGCCGATCTC
ACCCCGGCGG AGGTCGCTCC AGCTGCATTG GTCGAGGCGG ACATATACCG TAAGGGCGAA
GAACTCATGC CCTGGCAGCG AGCATTCGTC AGCTTGTTCC TGGAGCATCG GGAAACCTAC
GGCCAGGTCA GGCTACTGCT CGCCGACGAA GTCGGTGTCG GCAAGACCCT ATCTTTGGCC
GGCAGCGCGC TGGTCTCCGC ACTGCTGGGT GACGGCCCCG TCTTGATCTT GTGCCCGGCA
ACGCTGACGG CCCAATGGCA GATCGAACTC AAGGACCGCC TGAATATCCC CTCGGCGGTC
TGGCTGTCTC AGGAGAAGGC CTGGCTGCTC GATCCGGACG AGATCCCAAT GCCGTCGGTG
GGCCCCGAGG GAGTGGTCAA ATGCCCCCGT CAGATTGCCC TGGTTTCGAC GGGCCTCATT
TTCCACAAGA CCGAGGAGCG CGAGCTTCTA ATGTCCCGGC GTTACGGGAT GGTGATCCTG
GATGAAGCGC ACCGCGCGCG CGGCAAGACT GAGTCGGACG AGGAGGAGCG CAAGGCCAAC
AACCTGCTGT CGTTCATGAC CGAAATCGCC AAGAAGACGA CCCATGTTCT TCTCGGCACC
GCCACCCCGA TCCAGACCGA CGTCGAAGAT ATGTGGGACC TATTGAAGAT TCTCGGCATG
GGCGCTGAGC ATGTCATCGG CGACGCCTGG AGCGAGTGGA GGTCGACCGA AAAGGTCGTC
CCCGTGATCA CCGGCAAGCG GAAGGTGACT GACGATCGGG ACGCCTGGTC GCTCTTCCGG
AACCCGCTGC CTGCCTCGGC TGAAAACGAG GTCATTTTCG GGTTGATGCG CGGCGCGATC
GAGATGCCGC CGACGAGGTA CGTGACGCAG AAGGGGTTCA GCGACATCAA CGACGATTTC
TGCCGCGAGC AGTTTATCGA CGATGTGCTC ACTCCGAAGG GCGATCTCGG CTTTTTCCAG
CGCAACAACC CGGTCGTTCG GCACGTGGTG CTCCGCAAGC GCTCCACGCT GGAGCAGATG
AACCTGCTTC CGCGCATACC CGTCGACATT CACCCTCTAC CTGGCCAGCA CATGCCTGCC
TTGTTCGACG GGCTTGGCCT GAGAACTTCG AGCGCGTTCG ATGCGGCCTA TGAGGCGGCG
GACAAATTCA CCAAGGTGCT CCGGAAGCGG AAGAAGTCCG CCGGGTTCAT GCGCAGCCTG
ATGCTGCAGC GCCTATGCTC GAGCTACGCC AGTGGGCTGT CCACCGCGGA GAAGCTCCTT
GCCGGCCGCT CACTCGATGA CGAAGAGCTC ATGCTCGATC TGGGTCCAAA CGGCGTTGAG
CTGATCGACG AGGAAAGACT GCACCTGCAG ACGATCATCG ATGTGCTTTC CCCGCATCCG
ACCGACCCAA AATTGGACGC CGTCCTCTAC TTCCTTGAGG ACAAAGGCTG GTTGGAGAAG
GGCTGCATCA TATTCAGCCA GTATTTCGAC ACCACCAGGT GGATCGGGGA AACGCTGACC
GGACGGCTCC CCCGCGAACC GGTCGCGGTA TACGCTGGGG CCGGCAAATC CGGCATCTAC
ATCGGCGGCG AGTGGAAAAG CGTCGAACGC GAACAGATCA AGAAGGCGGT CAAAGAGCGG
ACCATCCGGC TGGTCGTTGC CACGGACGCC GCGTGCGAAG GCTTGAATCT CCAGACACTC
GGCACGCTGA TCAACGTGGA TTTGCCGTGG AATCCGTCTC GCCTCGAACA GCGCATCGGT
CGCATCAAGC GGTTCGGGCA ACGCCGCGAG CGGGTTGACA TGCTCAACTT AGTCTACCAC
GGGTCGCAGC AACTGACGGT CGACGAGAAA GTCTATCAAA AGCTTTCGTC GAGAATGAAA
GACCGCTTTG ACATCTTCGG AACGCTACCC GACGTCATCG ATGACGACTG GATCGATGAC
GAAGAGGAGT TCGACGCGCG ATTGAACGAT TTCACCGAGA AGCGCAAGCG CGCCAACGCG
TTTGATCTGC GATATGCGTC GGATGTTGAT CCCAAGGGAG AACGTTGGGA GCTTTGCGAG
AAAGTCTTGG CGCGTGCTGA TGTAACGAAA CGATTGTCGC GAGGATGGGG TGAGCGCGAG
CGGGCGGATG GGTGA
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| Protein sequence | MDVKPLGRST GLVGGGNLQR FSSRLGRLSH VYLKDQLRGA SEYRRIAGYF RSSIFDLVNE
EIEGIGKVRI VCNSDLDPED INAAKQARTQ LLKEKWNEVD DAVESFFRRP RYQRLFDILT
KGNVEIRVVS RADAPFVHGK AGVIYRPDGT SSAFMGSLNE TREGWSANYE FVWEDTSADG
VAWVEDEFEY LWERGKPLPD AIIEEIGRSA RRVEVQLADL TPAEVAPAAL VEADIYRKGE
ELMPWQRAFV SLFLEHRETY GQVRLLLADE VGVGKTLSLA GSALVSALLG DGPVLILCPA
TLTAQWQIEL KDRLNIPSAV WLSQEKAWLL DPDEIPMPSV GPEGVVKCPR QIALVSTGLI
FHKTEERELL MSRRYGMVIL DEAHRARGKT ESDEEERKAN NLLSFMTEIA KKTTHVLLGT
ATPIQTDVED MWDLLKILGM GAEHVIGDAW SEWRSTEKVV PVITGKRKVT DDRDAWSLFR
NPLPASAENE VIFGLMRGAI EMPPTRYVTQ KGFSDINDDF CREQFIDDVL TPKGDLGFFQ
RNNPVVRHVV LRKRSTLEQM NLLPRIPVDI HPLPGQHMPA LFDGLGLRTS SAFDAAYEAA
DKFTKVLRKR KKSAGFMRSL MLQRLCSSYA SGLSTAEKLL AGRSLDDEEL MLDLGPNGVE
LIDEERLHLQ TIIDVLSPHP TDPKLDAVLY FLEDKGWLEK GCIIFSQYFD TTRWIGETLT
GRLPREPVAV YAGAGKSGIY IGGEWKSVER EQIKKAVKER TIRLVVATDA ACEGLNLQTL
GTLINVDLPW NPSRLEQRIG RIKRFGQRRE RVDMLNLVYH GSQQLTVDEK VYQKLSSRMK
DRFDIFGTLP DVIDDDWIDD EEEFDARLND FTEKRKRANA FDLRYASDVD PKGERWELCE
KVLARADVTK RLSRGWGERE RADG
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