| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0008 |
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| Symbol | |
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| ID | 4020462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 9267 |
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| End bp | 10505 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637960184 |
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| Product | divergent AAA region |
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| Protein accession | YP_567149 |
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| Protein GI | 91974490 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTTC GCGAAATTGG CGCATGGCGG CTGGTCGGCG GCGAAACCGA CCGCATCGAG
TGCAAGGCAG GTTTCCGGCT TCAGCCGGAG GATCGGTTCT CGAAGGCGCT TCGCGCGATC
GCTGGGTTGG CCAACAACAA GGGCGGCTAC ATCCTATTCG GCGTCACGGA CGGGACCTAC
CAGGCGGATG GACTTTCCGA CGACGTATTC ACAAAATCAG ACATCTCGCT TCTCAACAGA
ATCTTGGCGA GCGCTCTTGA CCCCGTTCCT CACGTCACAA AGGGCCTCAT CGAGCTCGGC
GGAAAGCAGG TGGGTGTTCT CTACGTGGAA AAGCACGATC ATGGCCCCGT CATTGCCGTC
AAGAACGTCA GTCAAGATGT GAAGGAAGGA GGCATCTATT TCCGGTACGT CGGAGAAACC
CGCCTGATCA AGCCTGGAGA GCTCAGGCAG ATCATCGCCG CGCGCGAACA GCGGGCGGTC
GCTGAATTCA GTGCCCGCAT GAATCGCGTC GCTGTTGGTA AGGAAGCTAC GATCGACCTC
GATTCCGGCG AGGTCGCCGG CACAAGCGGC AAATTCCTCA TCGACAAATC TTTGCTCTCC
AGCATTCAGT TCGTGCGCGA GGGCGAGTTC GACGAAAAAA AGGGAGCGCC TGCACTCAGA
CTGATTGGCG ACGTCGAGCC CGTTTCGGCG GTGGAAAGGG AGCGAACGAG GGTTATCCGC
GAGAACGTGA CCCCCGACGC GGTCGTCCGC AACTTCCTGC GGAACGAGAA GGTCGCGGAG
CCGACGCAGT ACATCCATTT CCAGGCTCAC TCCCAACGGA AGTGGTTTCC CGTATGGTTC
TACATAGATC AGACGCGGTC GACCGCCTCC GAGGTCGCCG AGGATCTGCG CAAACAGGTC
GCCACCTATC CGTCGTCGCG CGACGCGCTG GTCGACCGGC TCGCGGGAAA GGACGCAGCC
TTCCGCCAAT CCACCGGGAA GGCCGAAGCT CTGCGCGCGA AGTTAGCGCG GGGCGACATC
AAGGCCCCGA CCGACATCGA CGCAGACGTC GTTTTCGCTG GTGCTGTCCA AGCGCTGCCT
ACGACTATGA AGCCAAAAGA CCTTGAGAGC ATTAGGACGG CCCTGCTCGA TTGCCTGGAT
CGCGCGCAGG ACACCGACCC CCGCAGCAGC AATCGTCGCG GAGCCATCTA CCGGGCCGCA
TGCCGTCTCG ACGAGTTGCT TTACTCGAAG AAAAGGTGA
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| Protein sequence | MFVREIGAWR LVGGETDRIE CKAGFRLQPE DRFSKALRAI AGLANNKGGY ILFGVTDGTY
QADGLSDDVF TKSDISLLNR ILASALDPVP HVTKGLIELG GKQVGVLYVE KHDHGPVIAV
KNVSQDVKEG GIYFRYVGET RLIKPGELRQ IIAAREQRAV AEFSARMNRV AVGKEATIDL
DSGEVAGTSG KFLIDKSLLS SIQFVREGEF DEKKGAPALR LIGDVEPVSA VERERTRVIR
ENVTPDAVVR NFLRNEKVAE PTQYIHFQAH SQRKWFPVWF YIDQTRSTAS EVAEDLRKQV
ATYPSSRDAL VDRLAGKDAA FRQSTGKAEA LRAKLARGDI KAPTDIDADV VFAGAVQALP
TTMKPKDLES IRTALLDCLD RAQDTDPRSS NRRGAIYRAA CRLDELLYSK KR
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