Gene Mbur_2401 details

Gene Information

• Locus tag: Mbur_2401
• ID: 3998989
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 2525468
• End bp: 2527411
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637960129
• Product: type II secretion system protein
• Protein accession: YP_567002
• Protein GI: 91774310
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2064] Flp pilus assembly protein TadC

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCAC TTGACATGTT GGCATACAGG CTCTTTGGAA AAAAAGTATC TTCAAACATT 
GAAGGCCACA AGCTGCTAAG GGGTAATATT CGTAAAGCGA GGATAGCTGT GCCGGTGGAT 
TACTATATCT GTTCAGCTTA TTTGTATTCA CTATGTTCTG GCATCTTTGG TGCATTTGTT 
GGTTTGATTA TTGGTGGGCA TGTAGCAAAT ATATTTGAAA TACAGCGTTT TTTTATATCC 
ACTGATCATA TGCCATATGT CTTACCAGCA TTTTCTGTAA TTTTCAGTTT AATTCTTTTC 
GTAGGGACTG CTTGGATCAC CTTCAGATTG TTTTTGCATT ATCCTTTAAT AAAGGCAAAT 
ATCAGACAAT CGTATATTGA CCAGTCATTA CCCCATGGAG TAGCATACAT GTATGCACTC 
ACAAAAAGTG GAGGAGTAAC GGTCCATGAT GCATTTCGTT CTTTAAGTGA ACATTCGCAT 
GTATATGGTT TAGCAGCCGA TGAATTTGGT TATATTGTAA GGGATATGGA TTATTTTGGA 
ATGGATGTGT TGTCTGCCAT TCGAAATTGT AGTTCAACAA CATCATCAAC TAATCTAAAG 
GCATTCCTCG ATGGTATATT ATTTGTGATC TCAAGTGGTG GGGACCTTAA TTCATACTTA 
CGGAGCAAGA CAGATCAATT CCATCTTGAT GCTACAAAAC AACAGAAGAC TTTTCTAGAG 
ATGCTCGGTG TACTCGCAGA GGCGTATGTA GCGGTATTTG TTGTTGGGCC AATTTTCATG 
ATAATTATTC TGGTAGTGTT TGGTTTTATG GGTTCCGGAT CAATGCCGAT CCTTTATACT 
TTGATATATC TGCTTATACC AGTAGGCACT TTGTTTTATC TGGTCCTCTT ATCAACAATT 
TCAAACAATT CAGTTGATAC CCATTCTACA ATTGTAAAAA ATAAGCTTAA TTCTTTTCCT 
GATGTGCGGA TAAATGAAAA AACTGATGTA GATGATGCTC TTATTGGGAG GCTTCTCCAT 
AATGAAAAAG TGTTCCGGCT AAAACATTTC CTAGCTCATC CATTCGCATC GGTGAAAAAA 
GACCCATCCT GTATTTTTTA CATAACTATT CCTGTGGGGA TTATCTATCT CTTATATATC 
ATTGATACAA ACTCAATTAC CCTGAACTTG AGCCTTATAG GGTTCAAATT GCATAATATG 
AATATAGAGG GTGCAATGGT ACTGGACGAC TATGTGATGT TCGCAACATT GCTTGTTTTT 
GTACCGTTCG TGATATTTTA TGAGTCTAAG GCAAGACGCA TAAGAAGTAT GGAGGACGAA 
TTCCCGGAAT TTTTGAATCG TCTTGCAAGT ATCAATGAAG CTGGAATTCT TCTCATCGAT 
GCTATTAACA TGGTTGCACA GACCAAGATC GGTGTTCTTC AATCCGAAGT ACGGAGGATG 
CAAAAAGGTC TTTCATGGGG TCAGGACCTT AGTTCTGTTT TTATGGAATT TGAATCCCGG 
GTAAAGACTA CTATGAATAG TCGAATTATC ACTTTGCTTG TTAAAGCAAG TGAATCCACA 
AGTGATATTA TTGGCGTTTT ACACATTGCA GCAAAAGATG CTGAGCTTCA GCAGAATCTA 
AGGAAAGAAC GCTCAACAGA GATGGCTGTA TATTTATTCA TTGTTTACAT CTCCTTTGCA 
GTCTTCCTTT TCATTATATA CGTCCTGACT GCTTATTTCA TACCTTCTAT CCCAAACACT 
ACTGACATGG CAGCAGGAAT GCCTCTGAAT ATTAATTTTG ATCCGGATGA ATTTTTCATG 
TTATTCTTCC ACGCATCATT GATTCAAGGT TTTTGTTCAG GGCTTGTGGC AGGTCAGATG 
GGTAGTGGAA ATCTGGCAGC AGGTGTGAAG CACTCGATGA TAATGATGTT GACCTCTTAC 
GTTATATTTA CGTTGTTGAT CTGA 

 

Protein sequence

MNSLDMLAYR LFGKKVSSNI EGHKLLRGNI RKARIAVPVD YYICSAYLYS LCSGIFGAFV 
GLIIGGHVAN IFEIQRFFIS TDHMPYVLPA FSVIFSLILF VGTAWITFRL FLHYPLIKAN 
IRQSYIDQSL PHGVAYMYAL TKSGGVTVHD AFRSLSEHSH VYGLAADEFG YIVRDMDYFG 
MDVLSAIRNC SSTTSSTNLK AFLDGILFVI SSGGDLNSYL RSKTDQFHLD ATKQQKTFLE 
MLGVLAEAYV AVFVVGPIFM IIILVVFGFM GSGSMPILYT LIYLLIPVGT LFYLVLLSTI 
SNNSVDTHST IVKNKLNSFP DVRINEKTDV DDALIGRLLH NEKVFRLKHF LAHPFASVKK 
DPSCIFYITI PVGIIYLLYI IDTNSITLNL SLIGFKLHNM NIEGAMVLDD YVMFATLLVF 
VPFVIFYESK ARRIRSMEDE FPEFLNRLAS INEAGILLID AINMVAQTKI GVLQSEVRRM 
QKGLSWGQDL SSVFMEFESR VKTTMNSRII TLLVKASEST SDIIGVLHIA AKDAELQQNL 
RKERSTEMAV YLFIVYISFA VFLFIIYVLT AYFIPSIPNT TDMAAGMPLN INFDPDEFFM 
LFFHASLIQG FCSGLVAGQM GSGNLAAGVK HSMIMMLTSY VIFTLLI