Gene Mbur_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1778 
Symbol 
ID3997753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1871554 
End bp1872399 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content42% 
IMG OID637959522 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_566417 
Protein GI91773725 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATACA TATATAATGT AATTTCCATT GCCCTCACAT CTATCGAAGC TCTCGTAACA 
GCTATTAACA TGCTCTTCAA CATAAGAAGC ATGCTAAAGG TCATAGACTC ACACTGTCAC
CTTGACTTCC CAAAGTTCAA TCGTGACCGT GATAAAACAA TAGAAAGAGC ACACAATGCG
GGTGTTGTTA AAATGGTCAA CTCAGGAATT GACCTGAAGA CAAACCAGGC AACACTCGCA
CTTGCAAACG AATACGATTT TATCTATCCT ACAATCGGCC TAAGCCCTCT GATAGTATCC
CACTACGGCA ACGAAGTCGC CAATTCGATT CTTCTCCAGC TAGAACTACA TGCAGAACAA
GCAGTAGGCA TAGGAGAAGC AGGTCTTGAC TATCATTACT ATAAGGAAGA CAAGGAAAGA
GAACACCAGA AACAATACTT TCGTAAAGTA ATAGAGATAG CAGAAAAATA CGAAAAGACA
CTCGTAATTC ACGGAAGGGA AGCTGAAGAA GACTGTTTTG AAATGGTAAA GGATCTCGAC
AAGGTTGTCT TCCACTGCTA TGGAGGTTCA ATAGAAACAG CGGCCAGAAT AAACGATGCA
GGATACTACA TATCCATCCC CACAATAGTC TGTTTTTCAG AGCATCATAA AAAAATAGCA
GAGAACGTCC CCCTTAACAA AATGCTCATT GAAACCGATA GCCCCTACCT GTCCCCTCGC
AAAGGAAGGA ATGAACCCGC ATTCGTACTG GACAACCTCT CAGTAATAGC AGAAGCAAAA
GGTACAGATA TTGAGACCAT TGCAAACGCC ACCTTCAGGA ACACAAAGAA GATATTTGGC
ATCTAA
 
Protein sequence
MLYIYNVISI ALTSIEALVT AINMLFNIRS MLKVIDSHCH LDFPKFNRDR DKTIERAHNA 
GVVKMVNSGI DLKTNQATLA LANEYDFIYP TIGLSPLIVS HYGNEVANSI LLQLELHAEQ
AVGIGEAGLD YHYYKEDKER EHQKQYFRKV IEIAEKYEKT LVIHGREAEE DCFEMVKDLD
KVVFHCYGGS IETAARINDA GYYISIPTIV CFSEHHKKIA ENVPLNKMLI ETDSPYLSPR
KGRNEPAFVL DNLSVIAEAK GTDIETIANA TFRNTKKIFG I