| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1593 |
|---|
| Symbol | |
|---|
| ID | 3998680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 1672886 |
|---|
| End bp | 1674400 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637959350 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_566247 |
|---|
| Protein GI | 91773555 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAA CATGCTGTTT TTTAAAAGAA ATCACTATGT ACCCTCATAC AAAATTAATC
AACCGTGTTC TTAGTATAAA TCCTGTTAAA CGCCAGAGTC TCATAGCATT ATTCTGGCAA
ATAGCATTTA CAGGCATCGG GTTTTTAAGT ACAATGTATT TTGCACATAC GGTAGGAGCT
GCAATTTTAG GTGCATATTT TCTTTTTATG GCATACACCA GTATTTTTAG CATGGTTGCT
GATGGAGGAT TCGGAGCTGC TGCAATTAAA CGCATAAGTG AAGGAGAAGA ACCAGATGCA
TACTTTAGTG CATCCTTTGT ATTGCGACTT GTGTTTACAA TTGTAATTGT AATTGCTTTA
CTGGTTTTTA GAGACTATTT TGTAGACCTC AATACCTCAG GCATGTTCAT CTGGCTGATA
ATAGCACTTT TAGTATCACT CTTTGAAGGT CCTATTTCTA CAGGGATCGC TGGCACAGGT
AAAATGGGAA TTCGACTTAC ATGTGCTGCC ATGGGTAATA TTTCACGTGT TATATTGCAG
GTTCTAGCGA TATATTTTGG TTACGAAGCA GCAGGCCTTG CCGGCGGCGC TGTAGCTGGA
ATACTTCTGT CAGTTATTAT TGAGTATCGC TTTTTTGATC TGCATCTTAA GCGTTTCAAG
TGGCATCATC TCAAAAGTTT GTCAGTATTT TCTTTCTGGA TATTTTTAAC AGCGGGTGGA
TCATTAGTGT TTTCACAAGC AGACACGGTT ATGATCGGAT ATTTCATGGA GAACGCTGAC
GTTGGCGTAT ATAGAGTAGT GCTTCAGTTC ACAACTGTTG CTACTTTCAC CACGTATGCA
CTTCGTAATA CACTATGGCC CAGAATCAGC CATTGGAGCA AGAGTGGTGA TCTCGGGTTG
GTAGAAGAAT CGTTATCTCG CGCAATTAGC TACTCTTTGA TACTGGCAGC ACCAATTTTA
ATAGGGGGAG TTATGCTAGG GGATAAATTA TTGTTTCTTT TTTACGGTAG CGAATTTGCA
GACAGCTACC TGTTATTGGT GATACTTCTA GCTGTACAGA TTGTTAATGT GTTTCAGTAT
TTTTTCACGA TGTACCTGAA TGCCATTGAT CATCCTAAAG AATCATTTAA GGTCACTTTC
ATTGGCGTTG CTGCAAACAT CGCACTTAAT TTCATTCTAA TTCCACTTAT CGGCATTAGT
GGCGCTGCTA TCGCAACACT GATAACTATG ACTTTAAATG GATTACTTGC AAGACGTGCA
TTGTCCCAAT TTATCACAAT ACGATTGGAG TCTCAAAGTC TGTTGAATAT CATCACAGCT
TCGGTAGTAA TGGGATTGAT AGTTGGCGGT TATCGTTTAC TTATACCACT TTCTAATTTA
TGGGTCACAC TTCCAGTGGT TGTCATCGGA GGGGGACTAT ATGGTGTGGT AGTGCTGAAA
CTTGACCGGA AGATATGTAG TGAATTGCGT GACATTGTGG AAGGAATGGG TATAATGTGG
CCAAAATGGT TGTGA
|
|---|
| Protein sequence | MLKTCCFLKE ITMYPHTKLI NRVLSINPVK RQSLIALFWQ IAFTGIGFLS TMYFAHTVGA
AILGAYFLFM AYTSIFSMVA DGGFGAAAIK RISEGEEPDA YFSASFVLRL VFTIVIVIAL
LVFRDYFVDL NTSGMFIWLI IALLVSLFEG PISTGIAGTG KMGIRLTCAA MGNISRVILQ
VLAIYFGYEA AGLAGGAVAG ILLSVIIEYR FFDLHLKRFK WHHLKSLSVF SFWIFLTAGG
SLVFSQADTV MIGYFMENAD VGVYRVVLQF TTVATFTTYA LRNTLWPRIS HWSKSGDLGL
VEESLSRAIS YSLILAAPIL IGGVMLGDKL LFLFYGSEFA DSYLLLVILL AVQIVNVFQY
FFTMYLNAID HPKESFKVTF IGVAANIALN FILIPLIGIS GAAIATLITM TLNGLLARRA
LSQFITIRLE SQSLLNIITA SVVMGLIVGG YRLLIPLSNL WVTLPVVVIG GGLYGVVVLK
LDRKICSELR DIVEGMGIMW PKWL
|
|---|
| |