Gene Mbur_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1459 
Symbol 
ID3998488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1534269 
End bp1534838 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content47% 
IMG OID637959216 
Productsulfopyruvate decarboxylase subunit beta 
Protein accessionYP_566116 
Protein GI91773424 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.417982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGTT TCGATGCCAT TAAAGCGATA GTTCAAAAGG CAGAAGACAA GGATTCACTC 
CTCATCTGCA ATATTGGATA CCCTTCCCGC GAACTACATC ACCTGAAAGA CAGGAGTGCG
AATTTCTACA TGCTGGGCTC AATGGGACTT TCATCATCCA TCGGCCTTGG AGTTGCCCTT
TCAGTTCCCG ACAGACATGT CATAGCAATA GACGGGGACG GTTCGGTCCT GATGAACATG
GGAAGTCTTG CCACCATTGC ACACCAGCAT CCTGAAAATT ACCTTTTGGT AGTGATAGAC
AATGGAGCCT ACGGTTCTAC CGGAAACCAG CTCACAGCCA CAGCTCTTGG CACCGACCTT
GCAATCGTTG CAAAAGGAGC TGGTATCGAT GAAGTTCATA ATACTTTCAG CGAAGAGGAA
TTCAGGGAGA AACTAAAAAA TGTTGACAGG GGAGTAATTG TGGTGCACGT TGATGCAGGA
AATTCAAAAG TTCCTGTGAT TCACCTGACC CCTGAAAAGA TAATCGAAAG GTTCATGTCC
GAATGCGCTC GACCATCGAT GTCATCCTGA
 
Protein sequence
MRRFDAIKAI VQKAEDKDSL LICNIGYPSR ELHHLKDRSA NFYMLGSMGL SSSIGLGVAL 
SVPDRHVIAI DGDGSVLMNM GSLATIAHQH PENYLLVVID NGAYGSTGNQ LTATALGTDL
AIVAKGAGID EVHNTFSEEE FREKLKNVDR GVIVVHVDAG NSKVPVIHLT PEKIIERFMS
ECARPSMSS