Gene Mbur_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1438 
Symbol 
ID3998466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1517581 
End bp1518294 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content44% 
IMG OID637959197 
ProductRNA binding protein 
Protein accessionYP_566098 
Protein GI91773406 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1096] Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCCT TGGGCGAGAA GCCAGAGGTC GAAGAGGAAG TATTAAGCAC TGCCAGTGAA 
AAGGTAAATG TGGCAGAAAA GAAGGTAGAG AAGAGGAAAA CCGAGGTAAC TAAGACCGAT
AAGGAAGATG ATCACGTGGA AGAGGAACAA CATGGAGATA AGGTCCTGGT AATGCCTGGA
GACATTATCG GCACTACCGA GGAATTTGAA GCAGGGGCTA ATACTTACAA TGTCAGAGGC
GACATTCATT CACTTGCGAC CGGATTCGTA ATGGTGAACA ATAAACGCAG GATGATATCA
GTAAAACCAA CTACAAGCAT GCCACCAACT ATAAAAAAGG GTGACATATT GATAGGAACG
GTTGTTAATG TTCGCGATTC TATGGCACTT GTGCAGATAG AAGGTATCAA GGGTGTCGTT
GACCGCCAGT TCATCAAACC CGGAATTGCT GCTATTCACG TGTCCAATGT GAAAGAATCA
TACGTTAAAG AAATGTCAAA GGAATTCGCT GTAGCTGATG TTGTTAAGGC GAAGGTCATC
AACCTTGAGA ATATGAGGAT GACCACTTCC GGAAATGAAC TTGGAGTAAT GGTCTCAACA
TGTGCCAACT GTGGAAGTAC GTTGAAGAAA GATGATCAGG TATTGAAGTG CCCTGAATGC
GGACGTACAG AGTCACGTAA GATATCCTCC GATTACGGCA CTGGTATTAT TTAA
 
Protein sequence
MNSLGEKPEV EEEVLSTASE KVNVAEKKVE KRKTEVTKTD KEDDHVEEEQ HGDKVLVMPG 
DIIGTTEEFE AGANTYNVRG DIHSLATGFV MVNNKRRMIS VKPTTSMPPT IKKGDILIGT
VVNVRDSMAL VQIEGIKGVV DRQFIKPGIA AIHVSNVKES YVKEMSKEFA VADVVKAKVI
NLENMRMTTS GNELGVMVST CANCGSTLKK DDQVLKCPEC GRTESRKISS DYGTGII