Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_1438 |
Symbol | |
ID | 3998466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 1517581 |
End bp | 1518294 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637959197 |
Product | RNA binding protein |
Protein accession | YP_566098 |
Protein GI | 91773406 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1096] Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACTCCT TGGGCGAGAA GCCAGAGGTC GAAGAGGAAG TATTAAGCAC TGCCAGTGAA AAGGTAAATG TGGCAGAAAA GAAGGTAGAG AAGAGGAAAA CCGAGGTAAC TAAGACCGAT AAGGAAGATG ATCACGTGGA AGAGGAACAA CATGGAGATA AGGTCCTGGT AATGCCTGGA GACATTATCG GCACTACCGA GGAATTTGAA GCAGGGGCTA ATACTTACAA TGTCAGAGGC GACATTCATT CACTTGCGAC CGGATTCGTA ATGGTGAACA ATAAACGCAG GATGATATCA GTAAAACCAA CTACAAGCAT GCCACCAACT ATAAAAAAGG GTGACATATT GATAGGAACG GTTGTTAATG TTCGCGATTC TATGGCACTT GTGCAGATAG AAGGTATCAA GGGTGTCGTT GACCGCCAGT TCATCAAACC CGGAATTGCT GCTATTCACG TGTCCAATGT GAAAGAATCA TACGTTAAAG AAATGTCAAA GGAATTCGCT GTAGCTGATG TTGTTAAGGC GAAGGTCATC AACCTTGAGA ATATGAGGAT GACCACTTCC GGAAATGAAC TTGGAGTAAT GGTCTCAACA TGTGCCAACT GTGGAAGTAC GTTGAAGAAA GATGATCAGG TATTGAAGTG CCCTGAATGC GGACGTACAG AGTCACGTAA GATATCCTCC GATTACGGCA CTGGTATTAT TTAA
|
Protein sequence | MNSLGEKPEV EEEVLSTASE KVNVAEKKVE KRKTEVTKTD KEDDHVEEEQ HGDKVLVMPG DIIGTTEEFE AGANTYNVRG DIHSLATGFV MVNNKRRMIS VKPTTSMPPT IKKGDILIGT VVNVRDSMAL VQIEGIKGVV DRQFIKPGIA AIHVSNVKES YVKEMSKEFA VADVVKAKVI NLENMRMTTS GNELGVMVST CANCGSTLKK DDQVLKCPEC GRTESRKISS DYGTGII
|
| |