Gene Mbur_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1423 
Symbol 
ID3998525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1503902 
End bp1504510 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID637959183 
Producttranslation initiation factor IF-2 subunit beta 
Protein accessionYP_566084 
Protein GI91773392 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain
[COG3269] Predicted RNA-binding protein, contains TRAM domain 
TIGRFAM ID[TIGR00311] translation initiation factor aIF-2, beta subunit, putative 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATT ACGAAACGAT GTTGAATAGG GCTATTGAAA ATCTCCCTGA TGTGGAAACT 
ACGGACGTCC GTTTCGTAAT TCCAGAACCC AGGATCTTCA TAGAAGGTAA AACCACCGTG
CTGGAGAACT TTGCCAACAT CGCAGATGTT CTGAACAGGG ACCCAGACCA TCTTATGAAA
TACCTTACCA GAGAAATGGG TACTGCGGCC AAACTCGAAG GCAGCCGTGC CATATTCCAG
GGAAAGTTCC CGAAAGAGAA CATAAAGTCG AACATCGATG CATATGTGGA AGAGTACGTA
ATATGCTCCG AATGTAACCG CCCTGATACC CAGCTTGTCA AATCTGACAG AGTCATTATT
TTAAAGTGTT CTGCTTGTGG AGCACATCGC CCTGTCAAGA AGAGGCGAAC TACAATTGCC
ACACCACGTG ACGCAGTTGA AGAAGGTGAG GAATATGAAG TAAGAATAGA TGCTGTCGGT
TCAAAAGGCG ATGGTATTGC TAAACTTGCT AAATTTACCA TATTCGTACC TGGCGCCACA
AAAGGTGATG TCCTGAAGAT CAAGATCAAG AGGATCAGTG GGAACCTCGC ATTTGCAGAA
CGCGTTTAA
 
Protein sequence
MDDYETMLNR AIENLPDVET TDVRFVIPEP RIFIEGKTTV LENFANIADV LNRDPDHLMK 
YLTREMGTAA KLEGSRAIFQ GKFPKENIKS NIDAYVEEYV ICSECNRPDT QLVKSDRVII
LKCSACGAHR PVKKRRTTIA TPRDAVEEGE EYEVRIDAVG SKGDGIAKLA KFTIFVPGAT
KGDVLKIKIK RISGNLAFAE RV