| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1384 |
|---|
| Symbol | |
|---|
| ID | 3997073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1473614 |
|---|
| End bp | 1474975 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637959147 |
|---|
| Product | electron transport complex, RnfABCDGE type, C subunit |
|---|
| Protein accession | YP_566049 |
|---|
| Protein GI | 91773357 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
|---|
| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000311988 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAAATG TATATGTTAT GGAAAAGATC CCTGAAAAGA TCATAATTCC CCTGAAACAG
CACGATGGGT GTCTTTGTAC ACCCCTTGTG AACAAAGGGG ATATGGTGTC AATGGGACAA
AAGATCGGGG AGTGCGAATG TTATGATTCG GCTGCCGTCC ATTCAAGTGT TTGCGGAGAG
GTTATATCTA TCGAAAAGGC TGCTAATCCG AATGGAACAA AAGTGAACAG TGTTATCATA
AAGCCGACCG AAGATGTCGA ATGTGTTGAT TTTACACCGG TAAAGGATGT TTCTGCATCT
AAACTCGTTG ATGTGATCAA GGATGCTGGT ATCGTAGAAC ACTATGGTAC TCCTACGCAT
AAGGTCCTGA GGCCGGAAGG GAAGCAGATC GATACAGTTC TGATAAACGC AACTTCTTCG
GAATGGATTG GCGGGCATTA TGATACATCT GCACAGTATG CCTCCCAGAT GATCGATGCT
TTGAAGTTGC TGATGAAGGC CGCAGGGGCT TCAAAAGGTG CTGTTGTGCT AAGAAATGAT
GACCTTGAGT CAATTAATGC TTTTGACCAT CTGAGAGTCG ATGGTAAGTT GTTGACAGTT
GCTCCTTTGA TGGGTAAGCG AAAACTCAGC TATTACTTCA AGGATATGGG CTCAGATATC
ATAGTGGTTT CCCAGGAACG CATTTATGGT CAGAAGATCC TTGACCTTTT GACCTATAAT
CTGACCGGAA GGAGAGTTTC TTTCTGTTGT GATCCTACTG ATGTAGGTGT TGCTATCTGT
GGTGTAAAGT CTGCAAAGGC ATTGTATGAT GCAGTGCACG AAGGCAGACC GTACATAGAA
ACAGTAGTTT CCGTTTCCGG CAAGGTCAAT AGCCCAAAGA AGATCCTGGT TAAGATCGGT
ACTCCTTTCA AGGATGTTAT CGATGCATGT GGTGGTTACA TGGGTGATAC GGGCAAACTC
ATTGCAAATG GTGCTGTCAC AGGTGTGGCA CAGTACACCG ATGATGTCCC GGTTACCAAG
ATGACAACTT CTATTACGGT TTTGTCCGCA GATGAGGTCA TAAGGGACGT GTCAATTGAC
TGTACTCACT GTGCAAGATG TGTGGATGTC TGTCCTGTGG ACCTTATTCC AAGCAGGATA
ACTGCTTTTG CAGACCAGGG TCGTTTCGAT GAGTGTCGCC AGATGAATAT TTTGAATTGT
GTGGAATGTG GTAGATGCTC AGCTGTCTGT CCTTCCAAGA TACATTTGTT ACAGCTTATC
AGATATGCAA AGAATTCCAT TGAGAATGCA TATGAAGACC TTTCTTCAAA GGAATCTCCT
GCGAATCTGA AATTAGGCTG CGGCTGTAGC GGAGGTAACT AA
|
|---|
| Protein sequence | MTNVYVMEKI PEKIIIPLKQ HDGCLCTPLV NKGDMVSMGQ KIGECECYDS AAVHSSVCGE
VISIEKAANP NGTKVNSVII KPTEDVECVD FTPVKDVSAS KLVDVIKDAG IVEHYGTPTH
KVLRPEGKQI DTVLINATSS EWIGGHYDTS AQYASQMIDA LKLLMKAAGA SKGAVVLRND
DLESINAFDH LRVDGKLLTV APLMGKRKLS YYFKDMGSDI IVVSQERIYG QKILDLLTYN
LTGRRVSFCC DPTDVGVAIC GVKSAKALYD AVHEGRPYIE TVVSVSGKVN SPKKILVKIG
TPFKDVIDAC GGYMGDTGKL IANGAVTGVA QYTDDVPVTK MTTSITVLSA DEVIRDVSID
CTHCARCVDV CPVDLIPSRI TAFADQGRFD ECRQMNILNC VECGRCSAVC PSKIHLLQLI
RYAKNSIENA YEDLSSKESP ANLKLGCGCS GGN
|
|---|
| |