Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_1336 |
Symbol | |
ID | 3997552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | - |
Start bp | 1423004 |
End bp | 1424143 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637959102 |
Product | hypothetical protein |
Protein accession | YP_566004 |
Protein GI | 91773312 |
COG category | [R] General function prediction only |
COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00270043 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGCTT ATAGACAGAA CGAACATCAT CTGACCTTAT CAGAGAGAAT GCAGATCCTC TCTGCAGGTA CTAAATATGA CAGTTGCAAT CAGAGTGCTG TCTGTCATGC TTTTGGTCCC GATGGAAGGT GTATACAGCT CTATAAGACA CTGTTATCGA ATTCCTGTGC AGGGGAGTGT GCCTATTGTC CGAACCGCTG TGAGCGTGAG ACTAAAAGAG CCTTTCTTGA ACCCGTAGAA ATTGCAAAGA TCACCTGGTC ATTTTACAGA AGGAATGCCA TCGACGGTCT GTTCCTGTCT TCTGGCATCA TGGGGGATGC AGAGTATACT TCGCAGAAGC AATTAGAGGT GGTGGAGCTG TTGCGTGGTC AGGGGTTTAA AGGCTACATC AATATTCGCG TGATGCCTGG CACTCCGAAA TATCTGCTTG AGCAGATCGC AGACCATGCC GATAAGTTTG GTGTAAATGC AGAGACTACC AATTCCGTTA ATTATTCAGA GATATGTCCG AATTTTGATT ATAAGAACGA TGTTCTGCAG AGGCTGAAAT GGACAAGGGA CCTCATTGAG AAGAAAAGAA GTGAATACTC CGGTATGGGG AAAATGGTTG GTGCAAATGA CACTCAATTC GTGTTGGGTG CGGTCGCTGA GTCTGACAAA GAGGTCGTGA AGACGGTCCA CAGGTTCATG GACAAGTATG CATTGCGAAG ACCTTATTTT ATGAGCTTTG ACCCTGTCCC TGATACTCCG CTCGAGAATG GTTCACCTTC ACCTAAATGG CGTGAGCAGA GGTTGTATCA GATGTCCTTT CTTTTAAAGG ACTATGGTCT CAGGTCAAGC GATTTCGATG AGATCTACGA TGAGTATGGC TATCTTTCAA ATGCTGACCC AAAGGAAGTG CTTGCACGAT CACAGCCGGA TCGTTTTCCG GTGGATATCA ATTCCGCTGA AATGTCCGAG TTGCTTATGG TTCCCGGAAT TGGGCCGATA AGTGCTAACC GTATCGTGCG TGCCCGTCCG ATAGTTTCCG AGCAGGAACT TTGCCGGGTG GGTGTGGTAG TTTCCCGTGC AAGACCTTAC ATTTCTATCA ATGGTTCAAG GCAGATGAAC CTTTCATCCT TTATGGGGGC ATGTTCATGA
|
Protein sequence | MSAYRQNEHH LTLSERMQIL SAGTKYDSCN QSAVCHAFGP DGRCIQLYKT LLSNSCAGEC AYCPNRCERE TKRAFLEPVE IAKITWSFYR RNAIDGLFLS SGIMGDAEYT SQKQLEVVEL LRGQGFKGYI NIRVMPGTPK YLLEQIADHA DKFGVNAETT NSVNYSEICP NFDYKNDVLQ RLKWTRDLIE KKRSEYSGMG KMVGANDTQF VLGAVAESDK EVVKTVHRFM DKYALRRPYF MSFDPVPDTP LENGSPSPKW REQRLYQMSF LLKDYGLRSS DFDEIYDEYG YLSNADPKEV LARSQPDRFP VDINSAEMSE LLMVPGIGPI SANRIVRARP IVSEQELCRV GVVVSRARPY ISINGSRQMN LSSFMGACS
|
| |