Gene Mbur_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1336 
Symbol 
ID3997552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1423004 
End bp1424143 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content47% 
IMG OID637959102 
Producthypothetical protein 
Protein accessionYP_566004 
Protein GI91773312 
COG category[R] General function prediction only 
COG ID[COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00270043 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTT ATAGACAGAA CGAACATCAT CTGACCTTAT CAGAGAGAAT GCAGATCCTC 
TCTGCAGGTA CTAAATATGA CAGTTGCAAT CAGAGTGCTG TCTGTCATGC TTTTGGTCCC
GATGGAAGGT GTATACAGCT CTATAAGACA CTGTTATCGA ATTCCTGTGC AGGGGAGTGT
GCCTATTGTC CGAACCGCTG TGAGCGTGAG ACTAAAAGAG CCTTTCTTGA ACCCGTAGAA
ATTGCAAAGA TCACCTGGTC ATTTTACAGA AGGAATGCCA TCGACGGTCT GTTCCTGTCT
TCTGGCATCA TGGGGGATGC AGAGTATACT TCGCAGAAGC AATTAGAGGT GGTGGAGCTG
TTGCGTGGTC AGGGGTTTAA AGGCTACATC AATATTCGCG TGATGCCTGG CACTCCGAAA
TATCTGCTTG AGCAGATCGC AGACCATGCC GATAAGTTTG GTGTAAATGC AGAGACTACC
AATTCCGTTA ATTATTCAGA GATATGTCCG AATTTTGATT ATAAGAACGA TGTTCTGCAG
AGGCTGAAAT GGACAAGGGA CCTCATTGAG AAGAAAAGAA GTGAATACTC CGGTATGGGG
AAAATGGTTG GTGCAAATGA CACTCAATTC GTGTTGGGTG CGGTCGCTGA GTCTGACAAA
GAGGTCGTGA AGACGGTCCA CAGGTTCATG GACAAGTATG CATTGCGAAG ACCTTATTTT
ATGAGCTTTG ACCCTGTCCC TGATACTCCG CTCGAGAATG GTTCACCTTC ACCTAAATGG
CGTGAGCAGA GGTTGTATCA GATGTCCTTT CTTTTAAAGG ACTATGGTCT CAGGTCAAGC
GATTTCGATG AGATCTACGA TGAGTATGGC TATCTTTCAA ATGCTGACCC AAAGGAAGTG
CTTGCACGAT CACAGCCGGA TCGTTTTCCG GTGGATATCA ATTCCGCTGA AATGTCCGAG
TTGCTTATGG TTCCCGGAAT TGGGCCGATA AGTGCTAACC GTATCGTGCG TGCCCGTCCG
ATAGTTTCCG AGCAGGAACT TTGCCGGGTG GGTGTGGTAG TTTCCCGTGC AAGACCTTAC
ATTTCTATCA ATGGTTCAAG GCAGATGAAC CTTTCATCCT TTATGGGGGC ATGTTCATGA
 
Protein sequence
MSAYRQNEHH LTLSERMQIL SAGTKYDSCN QSAVCHAFGP DGRCIQLYKT LLSNSCAGEC 
AYCPNRCERE TKRAFLEPVE IAKITWSFYR RNAIDGLFLS SGIMGDAEYT SQKQLEVVEL
LRGQGFKGYI NIRVMPGTPK YLLEQIADHA DKFGVNAETT NSVNYSEICP NFDYKNDVLQ
RLKWTRDLIE KKRSEYSGMG KMVGANDTQF VLGAVAESDK EVVKTVHRFM DKYALRRPYF
MSFDPVPDTP LENGSPSPKW REQRLYQMSF LLKDYGLRSS DFDEIYDEYG YLSNADPKEV
LARSQPDRFP VDINSAEMSE LLMVPGIGPI SANRIVRARP IVSEQELCRV GVVVSRARPY
ISINGSRQMN LSSFMGACS