Gene Mbur_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1188 
Symbol 
ID3998344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1279247 
End bp1280266 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content39% 
IMG OID637958955 
Producthypothetical protein 
Protein accessionYP_565861 
Protein GI91773169 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1503] Peptide chain release factor 1 (eRF1) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTCAAA TGGACAATAA GAAAAAAGTG GTAGAGAACC TGAACTCGAT ATTCAACCGT 
TATTCAGGAA AAGAAAAGTT AGAAAATGAG ATAGAGAAGC TGCAGTCACA TCTACTTGAG
ATGGAGATAG ACAAAACGCG ACTTGAAAAG AACGAAAATA ACACTAAAAA GGCCATTGCT
GCAAAACAGG AAGCTGAACA GAAACTGAAT GAGGCTACTG TCCGTGTAGA AACGCTTTCA
TACCAACTTG AAGAGCTAAA GAACAAAGGA ACGAATGAGA ACTCATTTAC CCTTATTGAA
GAGATATCAC CAACAATTTT TGAACCTTAC ATCGAAAGAT TAGCATCCAT AAATTCCGGC
AACGATTCAT TCATCACTGC ATACATTACA CATAAGCAGA TGCAGACCAA CGAGATACAG
ACAAAACTTG CAAACCATCT CGACCAGGAT ACATTGCAGT TGCTCAAAAA GATAAATACC
AATACTGGAT ATGTGTTATT CTACGATAAT ATGAAACTGG TCTGCGAGGT AATAGTACCA
CCCATCCCCA TAACCAAAAG TTCATTGGAG ATCGCAGGAT CGTTCAATGT AGAACCACTT
ACAAAGCTGT TAGCCCGGGA AATGACCGTC TGTGTACTTG CGACACATGC AGGAGAATCA
CTTATAGGAA TATCATCAGA TAAGAACATC TTTGACGAAG ATATGGTCAT CAGAAGCAGC
GTCAAGGCAA AACACACAAA GGGCGGATTT AGCCAAAGAC GTTTTGAGAG ACTTCGGGAT
GAAGATATTT CACACCACGC AGATAAAGTC AGAAGTGCAC TAAAAGATCT GCTTTCAAAC
TCGATAGCGG AAATCGACAT GATGTTCCTT TGCGGCGATA TTGTCCTTGC TGAACATATA
GTAGATGAGA TGAATCTAGA GATACCGTTG ATGGTAAGGA ATATTGACGC AAGGATAGAA
AAACATGATA CTGACAATAT TCTGAGAAGT ATTTTTAGTT GCCGTCGTTA TAGATTATGA
 
Protein sequence
MSQMDNKKKV VENLNSIFNR YSGKEKLENE IEKLQSHLLE MEIDKTRLEK NENNTKKAIA 
AKQEAEQKLN EATVRVETLS YQLEELKNKG TNENSFTLIE EISPTIFEPY IERLASINSG
NDSFITAYIT HKQMQTNEIQ TKLANHLDQD TLQLLKKINT NTGYVLFYDN MKLVCEVIVP
PIPITKSSLE IAGSFNVEPL TKLLAREMTV CVLATHAGES LIGISSDKNI FDEDMVIRSS
VKAKHTKGGF SQRRFERLRD EDISHHADKV RSALKDLLSN SIAEIDMMFL CGDIVLAEHI
VDEMNLEIPL MVRNIDARIE KHDTDNILRS IFSCRRYRL