Gene Mbur_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1172 
Symbol 
ID3998459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1261718 
End bp1262278 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content45% 
IMG OID637958938 
Product30S ribosomal protein S7P 
Protein accessionYP_565845 
Protein GI91773153 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01028] ribosomal protein S7(archaeal)/S5(eukaryotic) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000105021 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAGT TATTCGGAAA GTGGGACCTT ACAGAGGTCG AAGTCGCTGA CGCTGGTATC 
AAGAGATATG TCAACCTCGA TCCTGTTATC GTGCCACATA CATCAGGTAA ACACGCAAGG
CAGCAGTTCA ACAAGTCCGA CATTACAATC GTCGAGCGTC TTGTGAACAA TGTAATGCGT
AATGCACAGA ACACCGGTAA GAAGCAGATC GCTCTTCGTA TTGTGGATGA GGCTTTTGAC
ATCGTTAACT CGAAGACAAA GAAGAATCCT GTTCAGGTTC TCGTAGAAGC TGTTTCAAAT
GCTGGTCCAA GGGAAGAAGT TGTCAGACTT AAATACGGTG GTATCTCTGT ACCAAAGGCA
GTTGATACAG CTCCACAGAG GCGTGTTGAC CATGCATTGA GAAATATATC AATAGGTTCT
AATCAGACAG CTTTCAAATC AAAGCGCTCT GCAGCAGAAT GTCTTGCATC CGAGCTCATC
GCAGCTTCTA ACCGTGATGC AAAGTGCTTT TCCATCAACA GAAAGGATGG AAAGGAAAGA
GTCGCAAAGG CAGCACGTTA A
 
Protein sequence
MYKLFGKWDL TEVEVADAGI KRYVNLDPVI VPHTSGKHAR QQFNKSDITI VERLVNNVMR 
NAQNTGKKQI ALRIVDEAFD IVNSKTKKNP VQVLVEAVSN AGPREEVVRL KYGGISVPKA
VDTAPQRRVD HALRNISIGS NQTAFKSKRS AAECLASELI AASNRDAKCF SINRKDGKER
VAKAAR