| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0963 |
|---|
| Symbol | tfb |
|---|
| ID | 3997886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1044265 |
|---|
| End bp | 1045278 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637958745 |
|---|
| Product | transcription initiation factor IIB |
|---|
| Protein accession | YP_565654 |
|---|
| Protein GI | 91772962 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000142091 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGAAG TTGAAAGAGT AAGACATTCT GATACTTCAG AGAGAGAGAA GATACGTGCT
ATGATCAAGG CACGTAAGGA GAAAGAAAAG ACTACAGAGG TCGAGAACAA GGTGGTCGAG
TGTCCGGAAT GTGGCAGTCG TAGCCTTGAA CAAGACTATG AGCGCGCTGA ATTGGTCTGT
GCTGACTGTG GTCTTGTAGT GGATGCTGAA TTCGTTGATG AAGGTCCTGA GTGGCGTGCT
TTTGACCATG ATCAGCGTAT GAAGCGTTCT CGTGTTGGTG CACCTATGAC CTACACGATC
CACGACAAAG GTCTCTCTAC TATGATCGAC TGGAGGAATC GGGATTCTTA TGGTAAATCA
ATTTCTTCCA AGAACCGTGC ACAACTCTAT AGGTTGAGAA AGTGGCAGCG TAGAATTAGA
GTAAGCAATG CTACTGAAAG GAACCTCGCT TTTGCACTAT CCGAACTTGA CCGTATGGCA
TCTGCATTAG GTCTTCCACG TACTGTTCGT GAGACCGCCG CAGTTGTTTA CAGAAAAGCA
GTTGACAAGA ACCTTATCCG TGGCAGGAGT ATCGAAGGTG TTGCAGCAGC TGCGCTTTAT
GCAGCATGTC GCCAGTGCAG TGTACCTCGT ACTCTTGATG AGATCGGAGA GGTTTCAAGG
GTAAGCAGGA AAGAGATCGG AAGGACATAC CGTTTCATCT CCCGTGAGCT TTCGCTTAAA
CTTATGCCAA CTTCCCCTAT AGATTATGTT CCAAGGTTCT GCTCAGGTCT GAACCTTAAA
GGTGAAGTGC AGTCAAGAGG TGTGGAGATC CTTCGTCAGG CATCTGAGAA AGAGCTTACT
AGTGGCCGTG GTCCAACAGG TGTGGCTGCA GCAGCTATCT ATATCGCTTC CATTTTGTGT
GGAGAGCGCA GAACGCAGCG TGAGGTTGCA GATGTTGCCG GAGTTACCGA GGTTACTATC
CGTAACAGAT ATAAGGAACT AGCAGAAGAA TTGGACATTG AGATAATTCT CTGA
|
|---|
| Protein sequence | MVEVERVRHS DTSEREKIRA MIKARKEKEK TTEVENKVVE CPECGSRSLE QDYERAELVC
ADCGLVVDAE FVDEGPEWRA FDHDQRMKRS RVGAPMTYTI HDKGLSTMID WRNRDSYGKS
ISSKNRAQLY RLRKWQRRIR VSNATERNLA FALSELDRMA SALGLPRTVR ETAAVVYRKA
VDKNLIRGRS IEGVAAAALY AACRQCSVPR TLDEIGEVSR VSRKEIGRTY RFISRELSLK
LMPTSPIDYV PRFCSGLNLK GEVQSRGVEI LRQASEKELT SGRGPTGVAA AAIYIASILC
GERRTQREVA DVAGVTEVTI RNRYKELAEE LDIEIIL
|
|---|
| |