Gene Mbur_0438 details

Gene Information

• Locus tag: Mbur_0438
• ID: 3997633
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 425387
• End bp: 427330
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637958255
• Product: glycoside hydrolase 15-related protein
• Protein accession: YP_565176
• Protein GI: 91772484
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3387] Glucoamylase and related glycosyl hydrolases
• TIGRFAM ID: [TIGR01577] oligosaccharide amylase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.719432
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATCAGGC ATCTAAATGC TATACTCGGC AATGATAAAC TGCTCGTATC AATGGGTGAG 
AAAGGCAATC TTCTGGGATA TTTATACCCA AGGAGAGATT GGGCTCAACA TCTTGTAGAA 
TCCAAAGCCT GCATTTACAC AGGTGTAGAT CTACTATGGA CGGATTCTCC TGAATGGAAG 
TCAAAACAGG AATATGTGGA TGGTACAGAT GTAATCACAA CCCATCTGTC CCATTTTTCC 
GGTGTTGAAG TATCAATTCA TGACTTTATG CATGAGGAAA TGCCGGTCCT TGTACGAAAG 
TATGAGATCA CATCAAAAGA GTATATCAAT GGCAAATTCT ATTATTATTC TAATTTCCAG 
GCTGGAGAAA CCCATCGGAG AAACTCTGCT TTTTGTGATA AGGATGCAGG TCTGCTTGTT 
CAATACATGC AGAACTTCTA CATTGGCATA TCAAGTGCTC CTAAATTCGA GGAGTGGCAG 
GTTGGTAAGA TACAGGAGAA TGGGTGGGTG ACAAGTGCCA GAAGCGATAT GGAAGATGGT 
AATCTCCAGC GAAATGTTGA AGAGATCGGT GATCTGGATA GTTCGATCGG ATGGGAGCTT 
GATCTCTTGC CTGGTGAAAG TACCACTATC ACACTTTTTA TCGGTATCTC TTCAGAAAGA 
CAGTTGATAC ACGACCTGCT GGGTGATGTT CTGGAACAGT CCCCTGCTGA CATAATGCAT 
GGGTCTGAAG CTAGCTCAGT CCAATGGTTA TCAAAAAAGC GAGCTTTAGA CCTATCTGCA 
CTGGAAGAAG ATCCCCTTTT CAAAAATGAG GTCCATGGCT TATACGTTCG TTCATTACTT 
TCTTTGAACT TACTGAATGA TCCTTATGAG GGATCATTTG TAGCTTCTCC GGAGTTCGAC 
CCTGCTTTTG AGATGTGTGG GGGATATGGG TTCTGCTGGA ACCGGGACTC TGTAGAAGTC 
GTTCTTGCTC TATTGAATGC TGGTTATCCT GAATTTGCGG CAAAGTTCTT TGAATGGTGT 
AAAAGAACCC AACTTCCAAA TGGTTCGTGG TTCCAGAGAT ACTGGCTTGA TGGAAAACAA 
GCTCCTTCCT GGGGTAATTT TGATGATTCC ACGCAGATAG ATGAGACCGG TTCAACGCTT 
TATGCAATTG ATCACTATTA TCTAAAACTG GAAGTAGCTG AAAGATCTGA ATTTCTTAAA 
AACATGTGGG AAACGGTGCG TGGGGGTGCA GAATATCTCA TGGGAAGGAC TGTCCAGGGG 
CTTCACGATC CATGCAGGTG CCTGTGGGAA TCCGATAAAG GCATATTCAG TTATACAAAT 
GCTGCTATCT ATGCCGGTCT GAAAGGTGCT GCTCATCTGG CCAGGAATAA TGGTGAACCG 
GTGCTTGCGA AAAAATGGTC AGACAGGGCT GAACTGGTCA GGAAGGAAAC CATTGAGAAA 
CTGTGGCTTG AGGAAGGCTA TTTTTCCCGG GGTATTATTG ACAACAATAT CCACAGGACC 
GTGGATTCTA GCATGATCGG CACGTTCATT CCTTTTGCTC TTATTTCACC GAACGATCCT 
AATGAAAAAG CCATGATACT CTCAATGATA GAGCATATTG AAAGGGCTCT CAGGATTCCG 
GTCAATGAAT ATTTTGGGAT CAAACGTTAT GAAAATGACA ACTATATAGA TGGTAATCCG 
TGGGTTGTGA CAACATTATG GCTTTCCCGT GCCTTGCTCA CTCTTGCTTT CTCGCTGGAG 
AAAAGGGATG ATAAATATGA CCTGCTGGTG AATAAGGCAA TTGAATACAT AAAATGGACA 
ATTAGAAGTA CGACCAGCAC CGGGCTCTTA TCCGAGCAGG TTGATAAAAA TACCGGGCAA 
GCTGCATGGG CCAGACCATT AGGCTGGAGC TGTGCACTAT TTATAGAGAA TGCTCTGCTT 
CTGAATGAAT TGAAAAAAGC ATGA 

 

Protein sequence

MIRHLNAILG NDKLLVSMGE KGNLLGYLYP RRDWAQHLVE SKACIYTGVD LLWTDSPEWK 
SKQEYVDGTD VITTHLSHFS GVEVSIHDFM HEEMPVLVRK YEITSKEYIN GKFYYYSNFQ 
AGETHRRNSA FCDKDAGLLV QYMQNFYIGI SSAPKFEEWQ VGKIQENGWV TSARSDMEDG 
NLQRNVEEIG DLDSSIGWEL DLLPGESTTI TLFIGISSER QLIHDLLGDV LEQSPADIMH 
GSEASSVQWL SKKRALDLSA LEEDPLFKNE VHGLYVRSLL SLNLLNDPYE GSFVASPEFD 
PAFEMCGGYG FCWNRDSVEV VLALLNAGYP EFAAKFFEWC KRTQLPNGSW FQRYWLDGKQ 
APSWGNFDDS TQIDETGSTL YAIDHYYLKL EVAERSEFLK NMWETVRGGA EYLMGRTVQG 
LHDPCRCLWE SDKGIFSYTN AAIYAGLKGA AHLARNNGEP VLAKKWSDRA ELVRKETIEK 
LWLEEGYFSR GIIDNNIHRT VDSSMIGTFI PFALISPNDP NEKAMILSMI EHIERALRIP 
VNEYFGIKRY ENDNYIDGNP WVVTTLWLSR ALLTLAFSLE KRDDKYDLLV NKAIEYIKWT 
IRSTTSTGLL SEQVDKNTGQ AAWARPLGWS CALFIENALL LNELKKA